Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01948 ATGAAGGTGGTAGTGGAGGTCATTGATGCTCATGATCTTATGCCCAAAGACGGTGAAGGATCAGCAAGTCCATTTGTGGAAGTAGACTTTGAAAACCAACTAAGTAGAACTAGAACTGTCCCAAAGAACCTCAACCCCACTTGGAATCACAAATTAATCTTCCATTTAGATGCAACCAAACCTTGCCATTACCAAACTATTGAAGTCTCAGTTTACCACGAGAGGAGACCTTATCCTGGTAGAAACTTCCTTGGAAAGGTAAGAATTCCTTGCTCTAATCTTGTTAAGGAAGGTGAAGAAGTTTATCAAACTTACCCTCTAGAGAAGAAGTGGTTTTTCTCTTCTGTGAAAGGTGAGATTGGCCTGAAAATCTATATTGCATCACAGTCCAAACCCAAAGCTCCTCCTTCTTTGCTTCCTTCAGAACCAGAAAAACTCTCACCTTCAACTTCACCACAAGTACCAGAATCCACCACTACTAATAATCTTCCTCATTGTGCTCCCTCAACCACAGAAAATACAAAACAACCAGAAGCTGACCCCAAAGTTGAAGGTCCTGAATTTGACATATCAAAAGCAACCACAGAAGAAGCAGAGAAAGTAAACTCAGCCGCAGTAACAAATTTCTCTGCTGTAGCAGCTCAATCCAGTGGCATTGATACTGATCAAGATCCAAAGGAGGAAAGCAAAGAACCTGTCCTTGAGATAACTCAACAACTACACAAACACCAAGTTTTCCAGCAACCAATGATTTCAATAAAGAGAAGACAACGAGGTACTCCGGTCACAATGCACTCAGTGACCCCCCAAGTTCATCCTAGTAGTAGTAGCCATGGTGATGACTACAATCTGAAGGACACCAACCCTCAGCTTGGGGAACGGTGGCCTAATGGTGGAGCTTATGGTGGAAGAGGGTGGATGAGTGGTGGCAGCGAAAGATTCACAAGCACATATGACCTTGTGGAGCAGATGTCCTATCTGTATGTTCGGGTAGTGAAAGCCAAAGATCTTCCCCCCAGCACTCTCACCTCAAGCTGTGATCCTTATGTGGAAGTTAAGTTGGGGAACTATAAAGGAAGAACAAAGCATGTGGAGAAGAAATTGAACCCGGAGTGGAACCAAGTCTATGCTTTCTCCAAGGACAGAATTCAATCTTCTGTTTTAGAAGTCATTGTGAAAGATAAGGAAATGGTGGGAAGAGATGATTATATTGGAAGGGTGGTTTTTGACCTTAATGAGGTTCCAACAAGAGTTCCACCAGACAGCCCACTTGCTCCTCAGTGGTACAGAATTGAGGACAGGCAAGGACAAGGGAAGGTAAAGGGTGATATTATGCTTGCAGTCTGGATGGGAACTCAGGCTGATGAAGCTTTCTCAGAAGCTTGGCATTCTGACGCTGCCACTGTGTACGGGGAGGGTGTTTTCAACATCAGATCAAAGGTTTATGTGTCACCAAAACTGTGGTATCTCAGGGTCAATGTCATTGAAGCACAAGATGTGATACCAAATGACAGAAATCGCCTGCCAGAGGTTTCTGTCAAAGCTCAGTTGGGTAGCCAAGTACTGAGGACCAAGATATGTCCAACTAGAACAACTACACCACTTTGGAATGAAGATTTAGTTTTTGTGGCAGCTGAACCATTTGAGGAGCAATTGACAATTACTGTAGAGGATCGCGTGCACCCTTCAAAAGATGAGGTACTTGGGAAAATAATCTTACCATTAACTCTCTTTGAGAAGCGGCTAGACCATAGGCCACTTCATTCTCGCTGGTTCAATCTTGAGAAATTTGGTTTTGGAATGCTAGAAGCTGATAGGAGGAATGAGCTTAAATTTTCAAGCAGGATTCACCTAAGAGTTTGCCTTGAAGGAGGATACCATGTCCTAGACGAATCCACTTTGTACTCAAGTGATCAAAGACCAACAGCTAGACAGCTATGGAAGCAGCCTATTGGGATACTTGAAGTAGGTATCTTAGGAGCACAGGGGCTTCTCCCAATGAAGATGAAAGATGGCCGTGGCAGCACAGATGCATACTGTGTTGCCAAGTATGGCCAAAAATGGGTCAGAACAAGAACAATTCTTGACACTTTTAGTCCCAAATGGAATGAGCAATACACATGGGAGGTTTATGATCCATGCACTGTAATAACACTGGGGGTTTTTGACAATTGCCATTTAGGTGGAGGGGAAAAAGCTAATGGTAGCAGTGCAGCCAGGGATTCAAGAATTGGAAAGGTAAGGATTAGGCTCTCAACACTGGAAGCTCATAGGATTTACACTCATTCTTACCCTCTTCTTGCTCTGCACCCACACGGAGTCAAGAAGATGGGTGAGCTTCAGCTAGCAGTGAGGTTCACTACCCTCTCACTAGCTAATATGGTTTATATTTATGGGCAACCCTTGCTGCCCAAGATGCATTACTTACGTCCTTTCACAGTTAATCAAATAGAAAACTTAAGGTACCAAGCCATGAATATTGTAGCTGTAAGGCTTGGCAGAGCTGAACCTCCCCTGAGGAAGGAGGTAGTGGAGTACATGTTAGATGTTGATTCCCATATGTGGAGCATGAGAAGAAGCAAAGCCAACTTCCTTCGCATCATGTCACTTTTTTCTGGCATGATGACAATGGGGCAATGGTTCAGCCAAGTTTGCCATTGGAAGAACCCCATCACATCAGTTCTAGTTCACATTCTTTTCCTGATATTGATTTGGTACCCAGAGTTGATACTTCCAACTCTGTTTCTCTACATGTTCTTGATTGGCCTTTGGAACTATAGGTTTCGTCCTAGACACCCACCTCACATGGATACCAAACTCTCATGGGCAGAAGCAGTTCATCCAGATGAACTTGATGAAGAGTTTGACACATTTCCAACTTCTAGATCACATGATGTGGTGAGAATGAGGTATGACAGACTTAGAAGTGTTGCAGGTAGGATTCAAACAGTTGTTGGGGATATAGCTACACAGGGAGAGAGATTTCAGTCTCTACTGAGCTGGAGAGACACCAGAGCTACCAGCCTCTTTATAGTATTCAGCTTTTGTGCAGCTGTGGTTCTCTATGCAACACCACCAAGAGTGGTGGCTCTGGTAACAGGTTTGTATTATTTGCGGCACCCCAAGTTTCGTAGCAGGTTGCCTTCTTTACCCAGCAATTTCTTCAAAAGGCTACCAGCTCGAACAGATAGCATGCTGTGA 3201 0.4383 MKVVVEVIDAHDLMPKDGEGSASPFVEVDFENQLSRTRTVPKNLNPTWNHKLIFHLDATKPCHYQTIEVSVYHERRPYPGRNFLGKVRIPCSNLVKEGEEVYQTYPLEKKWFFSSVKGEIGLKIYIASQSKPKAPPSLLPSEPEKLSPSTSPQVPESTTTNNLPHCAPSTTENTKQPEADPKVEGPEFDISKATTEEAEKVNSAAVTNFSAVAAQSSGIDTDQDPKEESKEPVLEITQQLHKHQVFQQPMISIKRRQRGTPVTMHSVTPQVHPSSSSHGDDYNLKDTNPQLGERWPNGGAYGGRGWMSGGSERFTSTYDLVEQMSYLYVRVVKAKDLPPSTLTSSCDPYVEVKLGNYKGRTKHVEKKLNPEWNQVYAFSKDRIQSSVLEVIVKDKEMVGRDDYIGRVVFDLNEVPTRVPPDSPLAPQWYRIEDRQGQGKVKGDIMLAVWMGTQADEAFSEAWHSDAATVYGEGVFNIRSKVYVSPKLWYLRVNVIEAQDVIPNDRNRLPEVSVKAQLGSQVLRTKICPTRTTTPLWNEDLVFVAAEPFEEQLTITVEDRVHPSKDEVLGKIILPLTLFEKRLDHRPLHSRWFNLEKFGFGMLEADRRNELKFSSRIHLRVCLEGGYHVLDESTLYSSDQRPTARQLWKQPIGILEVGILGAQGLLPMKMKDGRGSTDAYCVAKYGQKWVRTRTILDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGGGEKANGSSAARDSRIGKVRIRLSTLEAHRIYTHSYPLLALHPHGVKKMGELQLAVRFTTLSLANMVYIYGQPLLPKMHYLRPFTVNQIENLRYQAMNIVAVRLGRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFLRIMSLFSGMMTMGQWFSQVCHWKNPITSVLVHILFLILIWYPELILPTLFLYMFLIGLWNYRFRPRHPPHMDTKLSWAEAVHPDELDEEFDTFPTSRSHDVVRMRYDRLRSVAGRIQTVVGDIATQGERFQSLLSWRDTRATSLFIVFSFCAAVVLYATPPRVVALVTGLYYLRHPKFRSRLPSLPSNFFKRLPARTDSML* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01948 1066 FunFam C2 domain-containing protein 635 790 - -
Rops7g01948 1066 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Rops7g01948 1066 CDD C2A_MCTP_PRT_plant 2 128 - -
Rops7g01948 1066 FunFam C2 domain-containing protein 475 622 - -
Rops7g01948 1066 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 326 466 IPR035892 -
Rops7g01948 1066 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 2 1066 IPR047259 -
Rops7g01948 1066 Gene3D C2 domain 1 146 IPR035892 -
Rops7g01948 1066 Gene3D C2 domain 321 468 IPR035892 -
Rops7g01948 1066 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 652 788 IPR035892 -
Rops7g01948 1066 ProSiteProfiles C2 domain profile. 308 429 IPR000008 -
Rops7g01948 1066 SMART C2_3c 653 763 IPR000008 -
Rops7g01948 1066 SMART C2_3c 326 423 IPR000008 -
Rops7g01948 1066 SMART C2_3c 2 103 IPR000008 -
Rops7g01948 1066 SMART C2_3c 489 587 IPR000008 -
Rops7g01948 1066 Gene3D C2 domain 476 621 IPR035892 -
Rops7g01948 1066 Gene3D C2 domain 634 790 IPR035892 -
Rops7g01948 1066 ProSiteProfiles C2 domain profile. 469 592 IPR000008 -
Rops7g01948 1066 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 488 643 IPR035892 -
Rops7g01948 1066 CDD C2B_MCTP_PRT_plant 326 452 IPR047257 -
Rops7g01948 1066 ProSiteProfiles C2 domain profile. 635 764 IPR000008 -
Rops7g01948 1066 MobiDBLite consensus disorder prediction 131 188 - -
Rops7g01948 1066 Pfam Plant phosphoribosyltransferase C-terminal 911 1066 IPR013583 -
Rops7g01948 1066 Pfam C2 domain 488 594 IPR000008 -
Rops7g01948 1066 Pfam C2 domain 2 107 IPR000008 -
Rops7g01948 1066 Pfam C2 domain 652 766 IPR000008 -
Rops7g01948 1066 Pfam C2 domain 326 421 IPR000008 -
Rops7g01948 1066 CDD C2D_MCTP_PRT_plant 653 783 IPR047255 -
Rops7g01948 1066 FunFam C2 domain-containing protein 321 467 - -
Rops7g01948 1066 MobiDBLite consensus disorder prediction 143 176 - -
Rops7g01948 1066 CDD C2C_MCTP_PRT_plant 489 641 IPR047258 -
Rops7g01948 1066 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 141 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01948 Rops-Chr7 32275236 32278436 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01948 2 1066 Lipid Metabolism Gene Families AT5G48060 67.775 0.0 1478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01948 - - lang:109333614 1877.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02875 8 64712770 64716367 Rops7g01948 7 32275236 32278436 ECH
Rops6g00666 6 17117234 17120931 Rops7g01948 7 32275236 32278436 ECH
Rops6g03562 6 60545376 60550272 Rops7g01948 7 32275236 32278436 ECH
Rops7g01948 7 32275236 32278436 Rops7g01948 7 32275236 32278436 ECH