Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00666 ATGATGCAGAGGCCTCCACCTGACGATTTTCTTTTGAAAGAGACCAAACCTCACCTTGGAGGTAGAAAGGTCTCTGGTGATAAACTCACAAGCACCTATGACCTTGTTGAGCAAATGCAATACCTTTATGTGAGGGTGGTTAAGGCTAAGGACTTGCCTGCAAAAGATGTCACTGGTAGTTGTGATCCTTATGTTGAAGTCAAGCTTGGGAACTACAAAGGCACCACCAGGCATTTTGAGAAGAAAACCAATCCTGAATGGAACCAGGTTTTTGCTTTCTCGAAGGACCGGCTTCAGGCTTCTGTGCTGGAGGTTACTGTGAAAGATAAGGATATTGTAAAGGATGACTTCATTGGTCGTGTCTGGTTTGATCTGAATGAGGTCCCGAAAAGGGTGCCTCCAGATAGCCCTCTTGCGCCGCAATGGTATAGATTGGAGGATAGAAAGGGTGATAAGGCAAAGGGAGAGCTAATGCTGGCTGTTTGGATGGGTACACAGGCTGATGAAGCATTTCCTGAAGCTTGGCATTCAGATGCTGCAGCAGTTAGTGGGAGTGATGCTCTTGCAAACATTAGATCCAAAGTGTATCTGTCTCCTAAGCTTTGGTATTTGAGGGTCAATGTAATTGAGGCACAAGACTTGCAACCAACTGATAAAGGTAGATACCCTGATGTTTTTGTGAAGGCTATTCTGGGAAATCAGGCCTTGAGGACTAGAATCTCTCAGAGCAGGAGTATCAATCCAATGTGGAATGAGGATTTGATGTTTGTGGCAGCAGAGCCATTTGAAGAACCTTTGATTTTGAGTGTGGAAGATAGAGTTGCCCCTAACAAAGATGAAGTATTGGGGAGGTGCGCAATTCCTTTGCAGTTTGTGGATAGGAGACTAGATCACAAACCTGTGAACACTAGGTGGTTTAATCTGGAAAGACATATTGTTGTAGAAGGGGAAAAGAAGAAAGAAGTCAAATTTGCAAGTAGGATTCACATGAGGATTTGTCTAGAAGGTGGCTATCATGTGTTGGATGAATCAACTCACTACAGCAGTGATCTTCGCCCAACCGCAAAACAGCTGTGGAAGTCTGGTATTGGTGTTCTTGAACTGGGAATATTGAATGCTCAGGGTTTGATGCCAATGAAAACAAAAGATGGGAGGGGAACAACTGATGCTTATTGTGTAGCAAAATATGGGCAGAAGTGGATCCGGACAAGGACAATCCTTGATAGCTTTACACCAAGGTGGAATGAGCAATATACTTGGGAGGTTTCTGATCCTTGCACTGTCATTACAATTGGTGTATTTGATAACTGTCATTTGCATGGTGGTGATAAGGGTGGTGGGGCAAAAGATTCAAGGATTGGAAAGGTACGAATCCGTCTGTCAACCCTTGAGACTGATCGTGTCTATACACATTCCTATCCACTTCTAGTTCTTCACCCCAATGGGGTGAAGAAAATGGGTGAAATTCACTTGGCTGTGAGGTTCACTTGTTCTTCCTTGCTCAATATGATGCACATGTATTCACAACCCTTGTTGCCAAAGATGCACTATATACACCCATTGACTGTTAGCCAGCTTGACAGTTTGAGGCATCAAGCTACTCAAATTGTTTCAATGAGACTGAGTCGTGCTGAGCCACCACTGAGGAAGGAGGTAGTTGAATATATGCTTGATGTGGGTTCCCACATGTGGAGTATGAGAAGAAGCAAGGCTAACTTCTTCAGGATTATGGGAGTTTTGAGTGGATTGATTGCTGTAGGAAAATGGTTTGATCAGATTTGCAATTGGAAAAGTCCAATTACAACTGTTCTGATCCATATCTTGTTCATAATATTGGTCATGTATCCAGAACTTATCTTACCAACAGTTTTCCTTTACCTCTTCCTGATTGGAATTTGGCACTATAGATGGAGGCCAAGGCACCCTCCTCACATGGACACCCGACTCTCTCATGCCGATTCGGCTCATCCTGATGAACTAGATGAAGAATTTGACACATTTCCAACTTCCCGGCCTTCTGACATTGTCCGGATGAGATATGACCGGCTTAGAAGTATTGCTGGGAGGATACAGACTGTGGTTGGAGACTTGGCCACTCAAGGGGAAAGGTTTCAGTCTTTGCTAAGCTGGAGAGATCCAAGAGCTACAGCATTGTTTGTGATATTCTGTCTTGTTGCTGCTATTGTACTGTATGTGACTCCATTCCAAGTTGTGGCTCTCCTGACAGGAATTTATGTGTTGAGACACCCGAGGTTTCGTCATAAGCTTCCTTCTGTGCCATTGAATTTCTTCAGGAGGCTGCCTGCAAGAACGGACTGCATGCTTTGA 2328 0.4403 MMQRPPPDDFLLKETKPHLGGRKVSGDKLTSTYDLVEQMQYLYVRVVKAKDLPAKDVTGSCDPYVEVKLGNYKGTTRHFEKKTNPEWNQVFAFSKDRLQASVLEVTVKDKDIVKDDFIGRVWFDLNEVPKRVPPDSPLAPQWYRLEDRKGDKAKGELMLAVWMGTQADEAFPEAWHSDAAAVSGSDALANIRSKVYLSPKLWYLRVNVIEAQDLQPTDKGRYPDVFVKAILGNQALRTRISQSRSINPMWNEDLMFVAAEPFEEPLILSVEDRVAPNKDEVLGRCAIPLQFVDRRLDHKPVNTRWFNLERHIVVEGEKKKEVKFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSGIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWIRTRTILDSFTPRWNEQYTWEVSDPCTVITIGVFDNCHLHGGDKGGGAKDSRIGKVRIRLSTLETDRVYTHSYPLLVLHPNGVKKMGEIHLAVRFTCSSLLNMMHMYSQPLLPKMHYIHPLTVSQLDSLRHQATQIVSMRLSRAEPPLRKEVVEYMLDVGSHMWSMRRSKANFFRIMGVLSGLIAVGKWFDQICNWKSPITTVLIHILFIILVMYPELILPTVFLYLFLIGIWHYRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSIAGRIQTVVGDLATQGERFQSLLSWRDPRATALFVIFCLVAAIVLYVTPFQVVALLTGIYVLRHPRFRHKLPSVPLNFFRRLPARTDCML* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00666 775 MobiDBLite consensus disorder prediction 9 23 - -
Rops6g00666 775 CDD C2B_MCTP_PRT_plant 41 165 IPR047257 -
Rops6g00666 775 Gene3D C2 domain 40 162 IPR035892 -
Rops6g00666 775 CDD C2D_MCTP_PRT_plant 365 492 IPR047255 -
Rops6g00666 775 Gene3D C2 domain 340 496 IPR035892 -
Rops6g00666 775 ProSiteProfiles C2 domain profile. 347 473 IPR000008 -
Rops6g00666 775 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 8 775 IPR047259 -
Rops6g00666 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 364 504 IPR035892 -
Rops6g00666 775 ProSiteProfiles C2 domain profile. 23 143 IPR000008 -
Rops6g00666 775 Pfam Plant phosphoribosyltransferase C-terminal 620 775 IPR013583 -
Rops6g00666 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 178 IPR035892 -
Rops6g00666 775 FunFam C2 domain-containing protein 347 499 - -
Rops6g00666 775 SMART C2_3c 365 472 IPR000008 -
Rops6g00666 775 SMART C2_3c 41 137 IPR000008 -
Rops6g00666 775 SMART C2_3c 203 301 IPR000008 -
Rops6g00666 775 Pfam C2 domain 202 308 IPR000008 -
Rops6g00666 775 Pfam C2 domain 41 143 IPR000008 -
Rops6g00666 775 Pfam C2 domain 365 475 IPR000008 -
Rops6g00666 775 CDD C2C_MCTP_PRT_plant 203 353 IPR047258 -
Rops6g00666 775 FunFam C2 domain-containing protein 36 180 - -
Rops6g00666 775 FunFam C2 domain-containing protein 189 334 - -
Rops6g00666 775 ProSiteProfiles C2 domain profile. 182 306 IPR000008 -
Rops6g00666 775 MobiDBLite consensus disorder prediction 1 23 - -
Rops6g00666 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 202 355 IPR035892 -
Rops6g00666 775 Gene3D C2 domain 189 333 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00666 Rops-Chr6 17117234 17120931 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00666 2 775 Lipid Metabolism Gene Families AT3G57880 91.860 0.0 1500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00666 - - zju:107407989 1508.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00666 6 17117234 17120931 Rops7g01948 7 32275236 32278436 ECH
Rops6g00666 6 17117234 17120931 Rops6g00666 6 17117234 17120931 ECH
Rops8g02875 8 64712770 64716367 Rops6g00666 6 17117234 17120931 PCT