Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1113 ATGGCTCTGCTCTCACACACCCCACACCCTTATGAAGTGCTCTTCGCCATCGCAATCTTCCTCGTATTCAGAGGGGTTTCAGGGGCAACCTTTACTTTCGTCAACAAGTGCGATTACACGGTGTGGCCAGGGATTTTAGGGACACCGGAACTCGCAAGCACGGGCTTTGAACTCGCGAAGGGGGGCTCCAGAAGCTTCCAGGCTCCGACCGGTTGGTCCGGTAGATTCTGGGGCAGAACCGGTTGCCAGTTCGACAATTCCGGCCGCGGGACGTGCTCCACCGCCGACTGCGGTTCCGGAGAGGTCAACTGCAACGGCGCCGGAGCCACCCCGCCGGCGACTCTCGCGGAGTTCACGCTCGGGACCGGTTCCATGGACTATTACGACGTGAGCCTCGTCGACGGCTATAATCTGCCGATGATAGTGGCTCCGAGAGGCGGGTCGGGGTCCTGCGCCGCCACGGGGTGCGGCGAGGATCTCAATCGGCGTTGCCCATCGGAACTAAGGGTGGAGGGCGGCGACGCGTGTCAGAGCGCGTGCAGCGCGTTTGGGAAACCGGAGTATTGCTGCAACGGTGCGTTTGGTAACCCTTCCACGTGCAAGCCTTCCACGTACTCGCAAATTTTCAAGTCCGCATGTCCCAAAGCCTATAGTTACGCGTACGATGATGCCACTAGCACGTTCACGTGTTCCGGCGCCGACTACACAATCACATTTTGTCCCTCTTCTCCTAGTTTGAAGTCTTCAACGGATTCGAGTCCAAAGGACACAGATTCTGGGTCTGGGTCTGGGTCTGGGTCTGGGAGTGTAACGGGGACAGGTTCATCGGTGGAACAATCTGAATTGGCTTCTACGTCGTGGTTAGCCGACATGGCAACGGCTACAGGGGCCTCGACGCGAGTACGGCCATTTGTCACTTCAAAGGTGACTTTTTGGGTGTTTGTTGTTTTCATTCTTTCTCTTTCGGTGGGTCCTTCTCTCTCCTAG 987 0.5745 MALLSHTPHPYEVLFAIAIFLVFRGVSGATFTFVNKCDYTVWPGILGTPELASTGFELAKGGSRSFQAPTGWSGRFWGRTGCQFDNSGRGTCSTADCGSGEVNCNGAGATPPATLAEFTLGTGSMDYYDVSLVDGYNLPMIVAPRGGSGSCAATGCGEDLNRRCPSELRVEGGDACQSACSAFGKPEYCCNGAFGNPSTCKPSTYSQIFKSACPKAYSYAYDDATSTFTCSGADYTITFCPSSPSLKSSTDSSPKDTDSGSGSGSGSGSVTGTGSSVEQSELASTSWLADMATATGASTRVRPFVTSKVTFWVFVVFILSLSVGPSLS* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1113 328 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Pvu2g1113 328 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 14 263 - -
Pvu2g1113 328 CDD TLP-PA 30 240 - -
Pvu2g1113 328 PANTHER OS03G0233200 PROTEIN 14 263 IPR001938 -
Pvu2g1113 328 SMART tha2 31 241 IPR001938 -
Pvu2g1113 328 Gene3D Thaumatin 29 241 IPR037176 -
Pvu2g1113 328 MobiDBLite consensus disorder prediction 244 275 - -
Pvu2g1113 328 ProSiteProfiles Thaumatin family profile. 28 241 IPR001938 -
Pvu2g1113 328 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Pvu2g1113 328 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Pvu2g1113 328 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Pvu2g1113 328 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Pvu2g1113 328 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Pvu2g1113 328 PRINTS Pathogenesis-related protein signature 231 240 IPR001938 -
Pvu2g1113 328 SUPERFAMILY Osmotin, thaumatin-like protein 29 242 IPR037176 -
Pvu2g1113 328 Pfam Thaumatin family 35 241 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1113 Pvu-Chr2 21799500 21801247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1113 13 265 Receptor kinase-like Gene Family AT5G38280 47.368 1.26e-76 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1113 - - gmx:100802906 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1113 2 21799500 21801247 Pvu2g1113 2 21799500 21801247 ECH
Pvu3g2711 3 49099152 49100572 Pvu2g1113 2 21799500 21801247 ECH
Pvu11g0350 11 2973199 2975463 Pvu2g1113 2 21799500 21801247 ECH