Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1463 ATGGCTGAGATTATGGTCATTTTTGACTTTGACTCAACAATCATTGAGTGTGACAGTGATAATTGGGTGCTTGATGACACTGCTTTAACTCAAAACTTCTACCAGCTTCTTCCTACCATGCATTGGAACCCTCTCATGGATAGGATGATGAAAGAGCTTCATTCACAAGGAAAAACCATTGAAGACATTGTGGAGATTCTGAAGAGGACACCAATGCATCCATGCATTGTTCCTGCTATTGAGGCAGCTTATTCCCTTGGGTGTGATCTGAAGATTGTGAGTGATGCAAATATTTTCTTTATTGAGACAATTCTGAAGCATCATGGAGTGTGGAACTGTTTCTCAGAGATCATTTGTAACCCCAGCCATGTCAAGGAAGGGAGCCTCAACATTTGTCCATACCATGATTACCTAAAATCTTCCCATGGATGCAATCTTTGTCCACCAAACATGTGCAAGGGAGTGGTGATAGAAAGGATTCAAAATTCCATGGCAGGAGCAGGAAAGAAGAAAGTAATCTATCTTGGAGATGGAAATGGAGATTTTTGCCCAAGTCTGAAGCTAAAAGAAAATGACTATTTGATGCCAAGAACAGGGTTTCCACTGTGTGATTTAGTCTCCAAAAATTCCACTAAGATAAAGGCAGAGGTGCATGGTTGGAGAGATGGGAAAGAGCTGCAACATGTTCTACTGCATCTCATCAACAAAGCTA 712 0.4101 MAEIMVIFDFDSTIIECDSDNWVLDDTALTQNFYQLLPTMHWNPLMDRMMKELHSQGKTIEDIVEILKRTPMHPCIVPAIEAAYSLGCDLKIVSDANIFFIETILKHHGVWNCFSEIICNPSHVKEGSLNICPYHDYLKSSHGCNLCPPNMCKGVVIERIQNSMAGAGKKKVIYLGDGNGDFCPSLKLKENDYLMPRTGFPLCDLVSKNSTKIKAEVHGWRDGKELQHVLLHLINKA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1463 237 Pfam Putative Phosphatase 4 234 IPR016965 GO:0016791
Pvu10g1463 237 PIRSF PLP_phosphatas_PHOSPHO2 1 237 IPR016965 GO:0016791
Pvu10g1463 237 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 236 IPR016965 GO:0016791
Pvu10g1463 237 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 197 IPR006384 GO:0016791
Pvu10g1463 237 PANTHER 2,3-DIKETO-5-METHYLTHIO-1-PHOSPHOPENTANE PHOSPHATASE 1 236 - -
Pvu10g1463 237 SUPERFAMILY HAD-like 4 186 IPR036412 -
Pvu10g1463 237 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 186 - -
Pvu10g1463 237 Gene3D - 2 188 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1463 Pvu-Chr10 41261924 41263819 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1463 K13248 - gmx:100785357 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1463 10 41261924 41263819 Pvu5g1657 5 38613195 38615603 ECH
Pvu2g3134 2 46709980 46711453 Pvu10g1463 10 41261924 41263819 ECH
Pvu10g1463 10 41261924 41263819 Pvu10g1463 10 41261924 41263819 ECH
Pvu10g1463 10 41261924 41263819 Pvu5g1656 5 38608079 38610528 PCT