Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3134 ATGGGCGGAAGCGTGGCGGCGACGGTGGTTTTCGATTTCGATCGAACCATTATCGACGATGACAGTGACAGATGGATCGTCACTGAGTTGGGTCTCACCCACCTATTCAACCAGCTTCGCCACACCATGCCTTGGACCTCTCTCATGGATAGGATCATGGAGGAGCTCCACTCGCACGGAATCACCATCGATCACATTGCAGAGTGCCTTATAAGAACCCCCTTGCATCCCAACATCGTTTCAGCCATCAAATCTGCACACGCTCTTGGTTGCGACTTGAGGATAATTAGTGACGCAAATGAGTTTTTCATTCGGACCATTCTGGAACACCATGGTTTATTAGGTTGCTTTTCACAGATTTATACCAACCGTGGTTTTGTAGATGATGAAGGACGTCTTCATGTCACTCCATTTCATGATTCAACCTTGTCTCCTCATGCTTGTTCCCTCTGCCCTCCCAATATGTGCAAGGGTTTAGTGATAGACCAAATTCGAGGTTCTTTACCTGGAAATGAAAGAAAATTCATATACCTTGGAGATGGATCAGGTGATTATTGTCCAACTTTGAAGCTGAAGGAAGGTGATTTTGTGATGCCCAGGAAGAATTATCCACTCTGGAACCGGATTCACAGTGACCCAAAATTAGTTGCTGCAGAAGTTCATGATTGGAGCAATGGGGAAGAATTGGAGAGCATTCTACTCAAGCTTATCAACAAAATAGCTCCCACTAGTGGCTATGTAGATTCTCACACCCTTCCCCTGTAG 765 0.4575 MGGSVAATVVFDFDRTIIDDDSDRWIVTELGLTHLFNQLRHTMPWTSLMDRIMEELHSHGITIDHIAECLIRTPLHPNIVSAIKSAHALGCDLRIISDANEFFIRTILEHHGLLGCFSQIYTNRGFVDDEGRLHVTPFHDSTLSPHACSLCPPNMCKGLVIDQIRGSLPGNERKFIYLGDGSGDYCPTLKLKEGDFVMPRKNYPLWNRIHSDPKLVAAEVHDWSNGEELESILLKLINKIAPTSGYVDSHTLPL* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3134 254 PANTHER THIAMINE PHOSPHATE PHOSPHATASE-LIKE PROTEIN 7 241 - -
Pvu2g3134 254 SUPERFAMILY HAD-like 8 187 IPR036412 -
Pvu2g3134 254 Gene3D - 4 192 IPR023214 -
Pvu2g3134 254 PANTHER PHOSPHATASE, ORPHAN 1, 2 7 241 IPR016965 GO:0016791
Pvu2g3134 254 Pfam Putative Phosphatase 9 237 IPR016965 GO:0016791
Pvu2g3134 254 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 8 201 IPR006384 GO:0016791
Pvu2g3134 254 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 9 189 - -
Pvu2g3134 254 PIRSF PLP_phosphatas_PHOSPHO2 3 241 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3134 Pvu-Chr2 46709980 46711453 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3134 K13248 - gmx:100306472 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3134 2 46709980 46711453 Pvu10g1463 10 41261924 41263819 ECH
Pvu2g3134 2 46709980 46711453 Pvu5g1657 5 38613195 38615603 ECH
Pvu2g3134 2 46709980 46711453 Pvu2g3134 2 46709980 46711453 ECH