Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1656 ATGGCTGGGATTGTGGTGGTTTTTGACTTCGACTCAACGATCATTGAGTGTGATAGTGACAATTGGGTTCTTGATGAGTTTGGTCTCACTCAAAAGTTCTATGAGCTTCTTCCCAACACTCTTTGGAACCCTCTCATGGATAAGATGATGGATGAACTTCACTCACAAGGAAAAACAATTGAAGACATTGTACAAGTTCTGAACAGGACTCCAATGCATCCCTCCATTGTCCCAGCCATACAAGCAGCATATTCCCTTGGGTGTGAGCTGAAGATTGTGAGCGATGCAAACAGTTTCTTTATTGAAAGAATTTTGAAGCATCATGGGGTTTGGAATTGTTTCTCTGACATCACTGCAAATCCCAGCTATGTTAATGAAGAAGGGAGACTCAGAATTTGCCCCTACCATGACTATGTCAAATCTTCTCATGGTTGTAATCTCTGTCCACCAAACATGTGCAAGGGATTGGTGATAGAAAGGATCCAAAATGATGGTGCAGAAGAGAAGAAGTACATTTATCTTGGAGATGGAAATGGAGACTTCTGCCCTAGTTTGAAGCTGAAAGAAAAGGACTATTTGATGCCTAGAAGGAATTTTCCATTGTGTGATTTAGTGTCAAAAAACCCTAATCACATAAAACCAGAGGTGCATGCATGGAGAAATGGGGAAGAACTTTATGATGTTATGCTCCATATTATCAACAAAATAATTGGTGAAGAAGGAAAGAACAGTGTTAGTAGTTCTTCTACTCCAACAATATCAATTGATTGCAAGTTGGGGTCAATTTCAATTGATCTTCATAATAACCCTTTGCCTAAAGCACTTCCAGTTCCTCAATAA 840 0.3952 MAGIVVVFDFDSTIIECDSDNWVLDEFGLTQKFYELLPNTLWNPLMDKMMDELHSQGKTIEDIVQVLNRTPMHPSIVPAIQAAYSLGCELKIVSDANSFFIERILKHHGVWNCFSDITANPSYVNEEGRLRICPYHDYVKSSHGCNLCPPNMCKGLVIERIQNDGAEEKKYIYLGDGNGDFCPSLKLKEKDYLMPRRNFPLCDLVSKNPNHIKPEVHAWRNGEELYDVMLHIINKIIGEEGKNSVSSSSTPTISIDCKLGSISIDLHNNPLPKALPVPQ* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1656 279 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 196 IPR006384 GO:0016791
Pvu5g1656 279 SUPERFAMILY HAD-like 5 185 IPR036412 -
Pvu5g1656 279 PANTHER 2,3-DIKETO-5-METHYLTHIO-1-PHOSPHOPENTANE PHOSPHATASE 1 279 - -
Pvu5g1656 279 Pfam Putative Phosphatase 4 233 IPR016965 GO:0016791
Pvu5g1656 279 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 185 - -
Pvu5g1656 279 Gene3D - 2 187 IPR023214 -
Pvu5g1656 279 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 279 IPR016965 GO:0016791
Pvu5g1656 279 PIRSF PLP_phosphatas_PHOSPHO2 1 237 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1656 Pvu-Chr5 38608079 38610528 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1656 K13248 - gmx:100789743 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1656 5 38608079 38610528 Pvu10g1464 10 41265390 41267528 PCT
Pvu10g1463 10 41261924 41263819 Pvu5g1656 5 38608079 38610528 PCT