Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1657 ATGGCTGGAATTGTAGTGGTTTTTGACTTTGACAAGACCATTGTCGACTGTGACAGTGATAACTGGGTTGTTGATGAGTTGGGTTTCAATGTTCTGTTCAATCGTCTTCTTCCTACCATGCCTTGGAACACTCTCATGGATAGGATGATGATGGAGCTTCATTCCCATGGAAAAACCATTGATGACATTGTGCAAGTTCTTCAGAGGATTCCTATACACCCCAGAATAATCCCTGCCATTAAAGCAGTTCATTCTTTAGGGTGTGATTTGAGGATTGTAAGTGATGCAAACACCTTCTTCATCGAGACAATTTTAAAACACTTAAAAATAAGAGAATGCTTCTCAGATATCAACACTAATCCAAGTTATATTAATGAAGATGGAAGGCTACAAATTTTGCCTTACCATGACTTCAACAACTTTTCCCATGGATGCACTTTGTGCCCTCCCATGTGCAAGGGTGGAATCATAGAGAAAATCCAAGAGTCATTAGGAGAAAAGAAGAGATTGATCTATCTTGGGGATGGTAGTGGAGACTATTGCCCAAGCTTGAGGCTGAAAGAACAAGACTTTATGATGCCCAGAAAGAATTTTCCTGTGTGGGAATTGATATGCAAAGACCCTTTACTTGTTAAAGCTCAAATTCATGAATGGACCAATGGAGAAGAGCTTGAAAGAATTTCATTGCAGCTAATCAACAAAATTTGTTCTGGAGAAAGTGATGAGTTCATTTCATCCAATTGCAAGCTGCATATTATGTGCGTGTTTGGTTCGCATTAA 780 0.391 MAGIVVVFDFDKTIVDCDSDNWVVDELGFNVLFNRLLPTMPWNTLMDRMMMELHSHGKTIDDIVQVLQRIPIHPRIIPAIKAVHSLGCDLRIVSDANTFFIETILKHLKIRECFSDINTNPSYINEDGRLQILPYHDFNNFSHGCTLCPPMCKGGIIEKIQESLGEKKRLIYLGDGSGDYCPSLRLKEQDFMMPRKNFPVWELICKDPLLVKAQIHEWTNGEELERISLQLINKICSGESDEFISSNCKLHIMCVFGSH* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1657 259 Pfam Putative Phosphatase 4 232 IPR016965 GO:0016791
Pvu5g1657 259 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 196 IPR006384 GO:0016791
Pvu5g1657 259 Gene3D - 2 186 IPR023214 -
Pvu5g1657 259 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 184 - -
Pvu5g1657 259 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 252 IPR016965 GO:0016791
Pvu5g1657 259 PIRSF PLP_phosphatas_PHOSPHO2 1 236 IPR016965 GO:0016791
Pvu5g1657 259 SUPERFAMILY HAD-like 5 186 IPR036412 -
Pvu5g1657 259 PANTHER INORGANIC PYROPHOSPHATASE 1 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1657 Pvu-Chr5 38613195 38615603 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1657 K13248 - gmx:100801052 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1463 10 41261924 41263819 Pvu5g1657 5 38613195 38615603 ECH
Pvu2g3134 2 46709980 46711453 Pvu5g1657 5 38613195 38615603 ECH
Pvu5g1657 5 38613195 38615603 Pvu5g1657 5 38613195 38615603 ECH
Pvu5g1657 5 38613195 38615603 Pvu10g1466 10 41274701 41276442 PCT
Pvu10g1465 10 41269194 41270933 Pvu5g1657 5 38613195 38615603 PCT