Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00648 ATGTCATCTGCTGGTGTCACCACTCTTAGCCCTGTTCCAAGGGAGCTATTGTTGTCCCCAGATGGATACTATACCCCATTGCACTTGTCATTGGACCACGAGGATCTTCTTTTGGAGCCAGTTATTGTTAATAAGAAAATTGAAATAGCTTCAGGGATTTGGAATATGATAAACTCTACATATGAAGGGCTAGACAGTGGAAATTATCCAATCAGATCTGCAGAGGGTACAGGGGGGGCTTACTTTATGCTTGATTCAACCGGGCAAAAGTATATATCTGTTTTTAAGCCCATTGATGAAGAGCCAATGGCTGTGAATAACCCTAGAGGTTTACCTGTCTCAGAAGATGGTGAAGGCTTAAAGAAGGGTACGAGAGTTGGTCAGGGAGCATTCAGGGAAGTTGCAGCTTATATTTTGGATCATCCAATGAGTGGCCGCCGATCATTATTTGGTGATGAGAAGGGCTTTGCCGGGGTTCCCCCGACTGTTATGGTTAAGTGCTTGCATAAAGGATTTAACCATCCTGGGGACTTGACTGCTAAGATTGGCTCCTTGCAAATGTTCATGGAGAATAATGGAAGCTGCGAGGATATGGGCCCTGGGGCTTTCCCAGTGAAGGAAGTGCATAAAATTTCAGTACTGGACATGCGACTCGCAAACGCAGATAGACATGCCGGCAATATTTTGATCGGCAAAGAGGAGGAAAATGACCAGGCTGTTTTGATTCCAATTGATCATGGATACTGCTTGCCCACAAGTTTTGAAGATTGTACCTTTGAATGGCTTTATTGGCCTCAAGCTCGCCAGCCATACTCCCCAGAGATCATTGACTATATAAGGTCACTGGATGCTGATGAAGATATTGCCCTTTTGAAGTTTCATGGATGGGATCTGCCAGTTGAATGCGCCCGTACTTTTCAAATCTCAACCATGCTTCTGAAGAAAGGAGTGGAGAGAGGGATGACCCCCTTTGCCATTGGAAGCCTTATGTGCAGGAAATCCTTGAACAAGGAGTCTGTGATTGAGGGAATTGTAAAGGCAGCTCTGGATTCTGTTCTTCCTGGCACAAGTGAAGCCACATTTCTAGATGCTGTTTCTGAAATCATGGACCAGCTCCTTGATGAGATCACCGGTTGGTGGTGGCGTCGTGGCAGTGACAATGCAACCGGTTAA 1173 0.4552 MSSAGVTTLSPVPRELLLSPDGYYTPLHLSLDHEDLLLEPVIVNKKIEIASGIWNMINSTYEGLDSGNYPIRSAEGTGGAYFMLDSTGQKYISVFKPIDEEPMAVNNPRGLPVSEDGEGLKKGTRVGQGAFREVAAYILDHPMSGRRSLFGDEKGFAGVPPTVMVKCLHKGFNHPGDLTAKIGSLQMFMENNGSCEDMGPGAFPVKEVHKISVLDMRLANADRHAGNILIGKEEENDQAVLIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSPEIIDYIRSLDADEDIALLKFHGWDLPVECARTFQISTMLLKKGVERGMTPFAIGSLMCRKSLNKESVIEGIVKAALDSVLPGTSEATFLDAVSEIMDQLLDEITGWWWRRGSDNATG 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00648 390 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 67 360 IPR000403 -
Pumo7g00648 390 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 38 348 IPR044571 -
Pumo7g00648 390 Pfam Phosphatidylinositol 3- and 4-kinase 76 325 IPR000403 -
Pumo7g00648 390 SUPERFAMILY Protein kinase-like (PK-like) 211 380 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00648 Pumo-Chr7 10642702 10645848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00648 34 375 Acyl Lipid Metabolism Gene Families AT5G24240 62.824 2.54e-161 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00648 - - gmx:100815111 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00648 7 10642702 10645848 Pumo10g01404 10 18752186 18756455 ECH
Pumo7g00648 7 10642702 10645848 Pumo7g00648 7 10642702 10645848 ECH
Pumo8g00861 8 33311938 33313863 Pumo7g00648 7 10642702 10645848 ECH
Pumo5g03908 5 89151108 89153955 Pumo7g00648 7 10642702 10645848 PCT