Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00861 ATGTCTCGGAAACTCGACAGCCCTGTGCAGACTCAGATGGCTGTGGCAGTGATAAGGAGCAGTCCCCTTGGGAGAGAGTACCATGGGAAGCAACCCGCAGGGCGGAGGCGTGTGTTTGTGCAAACGGAGAAAGGGTGTGTGTTGGGTATGGAATTGGATCGTGGTGACAATGTGCACACTGTTAAGAGGAGGTTGCAGCTTGCCCTCAATGTCCCTATGGATGAGAGCTATCTCACTTTTGGGGATATGGTCTTGAAGAATGACCTTAGTGCTGTTCGGAACGATTCCCCGCTTTTGCTCACTAGGGGGAATTCTCTTATGCATAGGAGCTCCTCCACGCCGTGTTTGTCGCCAAAGGGGAGGGACATCCAGCAGAGGGATAAGAGTGGCCCTATTGAGATATTGGGACAGTCAAATCGCCTTGATAGGATCAAGCACATGATCAAGGATATTATTAAGGCGATTAAGATGGGCATTGATCCGATTCCGGTGCATAGTGGGCTTGGAGGTGCGTACTATTTCAGAAACAGTAAGGGGGATTGTGTTGCAATTGTGAAGCCAACAGATGAGGAGCCTTTTGCCCCGAATAACCCGAAAGGTTTTGTTGGCAAGGCACTTGGGCAGCCTGGGCTGAAGCGATCTGTCCGGGTTGGGGAGACTGGCTTTAGGGAGGTTGCTGCATATCTTCTTGACTATGATCATTTTGCCAATGTTCCTCCTACTGCATTGGTGAAGATCACGCACTCGGTGTTCAATGTGAATGATGGTGTCAATGTAAACAATTTGTGGAGGAAGAGGCTGGTTAGCAAGATTGCGTCTTTCCAGCAGTTCATTCCTCATGATTTTGATGCCAGTGATCATGGGACATCAAGCTTCCCAGTTGCTTCTGTGCATCGTATTGGGATTTTGGACATTAGGATTCTTAACACGGATAGGCATGCTGGGAACTTATTGGTTAGGAAACTTGATGGCATTGGGAGTTTTGGTCAGGTGGAGTTGATTCCCATTGATCATGGGCTCTGCCTGCCTGAAACTTTGGAGGATCCATATTTTGAGTGGATTCATTGGCCACAGGCTTCCATTCCGTTCTCAGAGGACGAGCTTGCCTACATTGAAGATCTTGACCCTTATCGCGATTGTGAGATGCTGAGAATGGAACTGCCTATGATCCGAGAGGCGTGTCTCAGAGTCTTGGTGCTGTGCACTATTTTCCTCAAGGAGGCTGCGGCTTATGGTCTTTGCCTTTCTGAAATTGGTGAGATGATGACTAGGGAGTTCCGCAGGGGTGAGGAGGAGCCCAGTGAACTTGAGGTTGTTTGTTTGGAGGCGAGGAAGATAGTGGCGGATAGGGACAGGGAGGAACTGTCTCCTAAGGCTGAGATGAGAGATGATGAGTTTCTGTTTGATATAGATTATGATGAAGTTGGATTAGATTTTACGCCAAAGATGGCATTAGATGACCCTTTAACCAGAGCAACTTTTCAGCCTGCACTTGGGAACGGGCATGCTCGCAACCCGCTTTCCAAATTGGATGAATGCATTGAGGAGGAAGAAGAGGAAAGTGAGGGAGAATCTCCTCAGGGATTTGTCACTTCTTCTGCTGAAGAAAAAATCCCAACTGTTTCAGAACTTTCTGTGTCACTGAAAAATACCATGTTAGATGGGAAAAACCAGAATCAACAGAAATATTCTGGAGGAAAGGTGGATAATGGCCATTTTGCAAATACATCATCTGGTCATAAGAGTGCCAATGAGCAGCTTCCTGCAAGCATAAGCTTTGTGGATGTGACAGATATGACTGAGGATGAATGGACATTGTTTCTGGAGAAGTTTCGAGAGCTGCTGTATCCGGCATTTGCCAAGAGGAAATCCATAACCTTAGGTCAGAGGCAGAGACAGAGGCTTGGTACTTCCTGCCAGTTTTGA 1926 0.4746 MSRKLDSPVQTQMAVAVIRSSPLGREYHGKQPAGRRRVFVQTEKGCVLGMELDRGDNVHTVKRRLQLALNVPMDESYLTFGDMVLKNDLSAVRNDSPLLLTRGNSLMHRSSSTPCLSPKGRDIQQRDKSGPIEILGQSNRLDRIKHMIKDIIKAIKMGIDPIPVHSGLGGAYYFRNSKGDCVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKRSVRVGETGFREVAAYLLDYDHFANVPPTALVKITHSVFNVNDGVNVNNLWRKRLVSKIASFQQFIPHDFDASDHGTSSFPVASVHRIGILDIRILNTDRHAGNLLVRKLDGIGSFGQVELIPIDHGLCLPETLEDPYFEWIHWPQASIPFSEDELAYIEDLDPYRDCEMLRMELPMIREACLRVLVLCTIFLKEAAAYGLCLSEIGEMMTREFRRGEEEPSELEVVCLEARKIVADRDREELSPKAEMRDDEFLFDIDYDEVGLDFTPKMALDDPLTRATFQPALGNGHARNPLSKLDECIEEEEEESEGESPQGFVTSSAEEKIPTVSELSVSLKNTMLDGKNQNQQKYSGGKVDNGHFANTSSGHKSANEQLPASISFVDVTDMTEDEWTLFLEKFRELLYPAFAKRKSITLGQRQRQRLGTSCQF 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00861 641 MobiDBLite consensus disorder prediction 514 536 - -
Pumo8g00861 641 Pfam Phosphatidylinositol 3- and 4-kinase 168 417 IPR000403 -
Pumo8g00861 641 CDD Ubl_ubiquitin_like 38 88 - -
Pumo8g00861 641 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 158 455 IPR000403 -
Pumo8g00861 641 SUPERFAMILY Ubiquitin-like 35 90 IPR029071 -
Pumo8g00861 641 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 10 637 IPR044571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00861 Pumo-Chr8 33311938 33313863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00861 1 641 Acyl Lipid Metabolism Gene Families AT1G26270 68.875 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00861 - - gmx:100776828 1188.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00861 8 33311938 33313863 Pumo8g00861 8 33311938 33313863 ECH
Pumo8g00861 8 33311938 33313863 Pumo7g00648 7 10642702 10645848 ECH
Pumo8g00861 8 33311938 33313863 Pumo6g00402 6 5132396 5135606 PCT