Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3014 ATGCCAACGCCAGTATCCGTGGCGAGGCAATGCTTAACGCCGGAAGCCGGACGGGCACTAGACGAAGCTGTCGCGGTAGCAAAACGCCGCGGACATGCTCAAACGACGTCACTTCATGCAGTGTCAGCACTGTTATCGTTACCGTCTTCTTCGATTCTACGCGACGCGTGTTGTCGTTCGAGAAACTCGGCTTATTCGCCAAGGTTACAGTTTAAAGCGCTTGATCTTTGTTTATCGGTGTCGCTGGATAGAGCACCTTCTTCGCATAATAATGTTTCTCCCGATCACGAGCCGCCGGTTTCTAACTCGCTTATGGCTGCGGTGAAACGGTCTCAGGCGAATCAACGCCGTCATCCTGATAATTTTCATTTTTATCATCAGCAGCAGCAGTTGCAGAATCAGCAAACGTTTTCTGTTTCTTCCGTTAAAGTTGAGTTACAGCATTTGATTTTGTCTATTCTGGATGACCCGGTTGTTAGTCGGGTTTTCGCGGAGGCGGGTTTTCGGAGCTCCGAGATTAAGTTGGCTATACTTCGTCCTCTTCCGCATCTCTTTCGTTCTCGCGGTCCGCCTGTTTTTCTATGTAACCTAACGGAGCAGCCTCGCCGGGGGTTTGGGTTTGGGTTTCCGTTTTTGTCTGGTTTTGGTGATGAGGATGATAATTTCCGGCGGATTGGGGAGATTCTTGTTCGGAGTAAAGGGAGGAATCCTCTGCTTCTCGGTGCATGTGGTAATGATGCTCTGAGAAGCTTTACGGAGGCGGTGGAGAAAAGAAGGGAGGGGGTTTTGCCTCTGGAGCTTGCGGGGCTGCGCGTGATTTGTATTGGGAAGGAATTGGAGAGTGGTGATGGTGAGATAGTGGGTTTGAGGTTGAGGGAGATTGCTGTTATGGCGGAGGAGTGCGTGGGACCCGGTGTTATAGTGAGTTTTGGGGAGTTGAAGGGTTTGGTGAATGGTGAGGGTGGGTTTGGGGAGAGTGTTGTTGAGGAATTAGCGAAATTGTTGAAGATTCATTATGATAAGTTTTGGTTGGTGGGTTCTGCTGCTAGTTATGAGAGTTACTTGAAATTTCTTGGTAGGTTTCCTTCTGTGGAGAAAGATTGGGATTTGCAGATTCTTCCCATCACTTCTGTTAAGCCTTCTGAATCATATCATAGCCCCAGACCAAGCTTAATGGATTCTTTTGTACCACTTGGTGGCTTTTTTTCATCACAATCTGATTTGAAAAGACCACTAGATGGTTCATTTGGATGTGTTCCTCACTCTCATCAATATGGTGAAAACTGTGAACATGAAATCCTTGCTGGTTCGAAGGAAAGATTTTCTGTTTCGGCTCCTGATCTATACTCATCTAGCTTACCTCAATGGTTAAAGACTACAGAATTTGGCACTGCAAAAGCATTGAATGTTAAGACCAAAGATGGTGTTTTGGTGGATAGTAGTGAATCTTGTACGACGCATACCAACTTGGACAACATATGCCAAGTTCTGCATCAGCGTATACCCGAGGAAAATACTTGTCCTATTGTTGTGGGGTTTCATTGTACTGCTGACAACAAAAATGAAGATGCTGACAACCGCAGAAGCAAAATCTTAGACAAATCACCTACTGAACACATCAACCTCAACTCTCATGTACCCGTTGGTGTTCAATCAATGGCAACATTACAATCCAGAAGTCCTTTTCCCGCTCTCTTCATGACAAAACAGGATAACAATACTCCGAAACTAACTGAGATGTTCCAGAAAGTAAAAGATCTCGAGACAGGTGACCTAAGATCATGCAACATGTCCAGTTCAAGTGTGTCCGATGGTAGTCAACTGTCTCCCACATCTGTGACTTCAGTAACCACCGACCTTGGCTTAGGAATATGCTCCTCTCCTACCAGCAATAAATTGAAGAAACCTACAGTTCAATATACAATGGAGCCTCCAAAGGAAACCCCTAATCGATTTTCTTCAAGCTTTAATTTGGATGAAGAGAATATCATGAAGCATCCATCTCAATCTTCATCCTGCTTAAGTTATGACTATTGTCGACAAGTTGATGCAAGAAATCCTAAAGTTATTTTTGAAGCTCTTTCCAAGGAGGTAAGCTGGCAAGAGGAAGCCATAAGGGCTATTATCAGAACAATAGTCAGCGGCTCAACAAAAAGGGATAAAGACCATGGAGCAAGGGGAGACAGATGGATGAATTTTGTTGGACCTGATAGGCTTGGGAAAAAGAAACTTGCGGTTTCTCTAGCTGAGTTACTGTATGGAAGCCGGGAAAACTTCACTTTTGTGGATCTAAGTTCCGAAGAAGTGGTTGGATGCCACATGAAATTTAGAGGGAAGACTAACCTTGATTTCATTGTAGATGAGTGCTGCAAGAAACCCTTGTCTGTTGTTTTCATTGAAAATGTTGACAAAGCAGATATAGTAGCTCAAACTAGTTTGTCTCAAGCCATCAAGACAGGAAAAATCATAGATTCGCATGGACGCGAAGTTAGTGTAAACAATGCAATATTCGTGCTTTCTTTCTCAGGTTACGAAAATAGTTTGATGCAAACAAGGGGGCCTTCCTACTATTCTGAGGAAAGAATACTGAGGGAGAAGGGAGTAGCTATCAAGATAAAAGTTGAACATGTGGTTAGAGACAACAGAAGCCAAAGCATCAGTATAACTAACAATTCAACCGATGTCATTCCTAATCTAAATTTCATGAACAAACGAAAACTGGTTGGTGACAATGAACTTCACGATCCTCATTTTCTCTCAGATACGGCCAAAAGGCCACATACAACATCAAACTGGCTTTTAGACTTGAATCTTCCAGCTGAAGAGGATGAACAGAAACAAACAGATGATGGAAACTATGAACATGTCTCAACTGAGAACCAAAACCTTTGGTTGCAAGATTTGTATAATCAAGTCGATGAAACAGTTGTTTTCAAACCATATGATTTTGATGCACTTGCGGATAGATTGTTGAAATTGGTCAGAAGTAACTTCAACAAAATTCTTGGTTCCGAGTGTGTCTTACAAATCGAAACAGAAGTCACGGACCAATTGGTTGCAGCCGCATATGGCTCATACAGGGATATGGAGGTGGAGAATTGGGTTGAACAAGTGTTGTGTGGTGGATTCAGTGAAGTCCAGAGAAATTACAACCTCAGTGGTAGTTCCATTGTGAAACTTGCCACATGTCCAGAGCAAGCTCTAAGTGTACACCTTCCACCAAGCATAATTTTAGAGTAA 3240 0.4336 MPTPVSVARQCLTPEAGRALDEAVAVAKRRGHAQTTSLHAVSALLSLPSSSILRDACCRSRNSAYSPRLQFKALDLCLSVSLDRAPSSHNNVSPDHEPPVSNSLMAAVKRSQANQRRHPDNFHFYHQQQQLQNQQTFSVSSVKVELQHLILSILDDPVVSRVFAEAGFRSSEIKLAILRPLPHLFRSRGPPVFLCNLTEQPRRGFGFGFPFLSGFGDEDDNFRRIGEILVRSKGRNPLLLGACGNDALRSFTEAVEKRREGVLPLELAGLRVICIGKELESGDGEIVGLRLREIAVMAEECVGPGVIVSFGELKGLVNGEGGFGESVVEELAKLLKIHYDKFWLVGSAASYESYLKFLGRFPSVEKDWDLQILPITSVKPSESYHSPRPSLMDSFVPLGGFFSSQSDLKRPLDGSFGCVPHSHQYGENCEHEILAGSKERFSVSAPDLYSSSLPQWLKTTEFGTAKALNVKTKDGVLVDSSESCTTHTNLDNICQVLHQRIPEENTCPIVVGFHCTADNKNEDADNRRSKILDKSPTEHINLNSHVPVGVQSMATLQSRSPFPALFMTKQDNNTPKLTEMFQKVKDLETGDLRSCNMSSSSVSDGSQLSPTSVTSVTTDLGLGICSSPTSNKLKKPTVQYTMEPPKETPNRFSSSFNLDEENIMKHPSQSSSCLSYDYCRQVDARNPKVIFEALSKEVSWQEEAIRAIIRTIVSGSTKRDKDHGARGDRWMNFVGPDRLGKKKLAVSLAELLYGSRENFTFVDLSSEEVVGCHMKFRGKTNLDFIVDECCKKPLSVVFIENVDKADIVAQTSLSQAIKTGKIIDSHGREVSVNNAIFVLSFSGYENSLMQTRGPSYYSEERILREKGVAIKIKVEHVVRDNRSQSISITNNSTDVIPNLNFMNKRKLVGDNELHDPHFLSDTAKRPHTTSNWLLDLNLPAEEDEQKQTDDGNYEHVSTENQNLWLQDLYNQVDETVVFKPYDFDALADRLLKLVRSNFNKILGSECVLQIETEVTDQLVAAAYGSYRDMEVENWVEQVLCGGFSEVQRNYNLSGSSIVKLATCPEQALSVHLPPSIILE* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3014 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 690 1029 IPR027417 -
Psa5g3014 1079 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1077 - -
Psa5g3014 1079 Gene3D - 10 179 IPR036628 -
Psa5g3014 1079 Gene3D - 658 888 IPR027417 -
Psa5g3014 1079 ProSiteProfiles Clp repeat (R) domain profile. 8 183 IPR004176 -
Psa5g3014 1079 MobiDBLite consensus disorder prediction 595 614 - -
Psa5g3014 1079 PANTHER PROTEIN SMAX1-LIKE 8 1 1077 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3014 Psa-Chr5 232589407 232594981 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3014 - - gmx:100800606 1536.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1950 6 121671192 121675434 Psa5g3014 5 232589407 232594981 ECH
Psa5g3667 5 288845302 288850413 Psa5g3014 5 232589407 232594981 ECH
Psa2g1342 2 102438143 102443644 Psa5g3014 5 232589407 232594981 ECH
Psa5g3014 5 232589407 232594981 Psa5g3014 5 232589407 232594981 ECH