Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3496 ATGGCTTCTTCTACTCAATTTGCTACCACTTTGGTCGCCCTAATTCTGCTTCAATACCTAATAGGTTCATATTCAACGACATTCACAATCGTTAACCAGTGCAGTTACACAGTTTGGCCAGGAATTTTATCCGGCGCCGGGACAGAACCTTTCTCAACCACCGGTTTCGCTCTTCAACCCGGCGAGTCCAATGCTCTCGCCGTACCACCTTCATGGTCCGGCCGTCTATGGGGACGAACCCTCTGCTCACAAGATTCCACCGGGAAATTCTCATGCATAACCGGCGATTGTGATTCCTCCACCATCGAATGTGCAGGCAAAAACGCCATACCTCCTGCTTCCTTAGCGGAGTTCACTCTCAACGGCGCCGGAGGACTTGATTTCTTCGACGTCAGTCTCGTCGACGGTTACAACCTCCCTATACTAATCGAACCACATGGACAAACTGGCGGAGGAAACTGCACGGCGACGGGTTGCTCCGTCGACTTAAACGCGGCGTGTCCAACAGAGTTGAAAGTGATGAGTAGTAGCGACGGTGGAGAGAGCGTGGCGTGTAGAAGCGCGTGTGAAGCTTTTGGGGATCCGCAATATTGCTGTAGTGGCGCCTACGGTTCGCCAGATACATGTAAACCAAGTTCCTACTCGCAGTTTTTCAAGAGCGCGTGTCCACGCGCTTATAGTTACGCCTATGACGATGGATCTAGCACTTTCACGTGTGCCTCTGCTGATTATACCATCACTTTTTGCCCAACACTTTCCACAGGTTCAATCAAATCTGGGAACGAGAAATATCCGGTACCGACGGGGGATGTATCTGGTGTCCGACATGTAGATCAGAGAGGCAACAACCTAGTGACTATTATTGTTGCGTTTGTTTTGATGGTCTTGGTGGTTGACCGGTTGTGGTAG 909 0.505 MASSTQFATTLVALILLQYLIGSYSTTFTIVNQCSYTVWPGILSGAGTEPFSTTGFALQPGESNALAVPPSWSGRLWGRTLCSQDSTGKFSCITGDCDSSTIECAGKNAIPPASLAEFTLNGAGGLDFFDVSLVDGYNLPILIEPHGQTGGGNCTATGCSVDLNAACPTELKVMSSSDGGESVACRSACEAFGDPQYCCSGAYGSPDTCKPSSYSQFFKSACPRAYSYAYDDGSSTFTCASADYTITFCPTLSTGSIKSGNEKYPVPTGDVSGVRHVDQRGNNLVTIIVAFVLMVLVVDRLW* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3496 302 CDD TLP-PA 27 249 - -
Psa2g3496 302 PANTHER OS03G0233200 PROTEIN 11 266 IPR001938 -
Psa2g3496 302 ProSiteProfiles Thaumatin family profile. 25 250 IPR001938 -
Psa2g3496 302 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 11 266 - -
Psa2g3496 302 Pfam Thaumatin family 32 250 IPR001938 -
Psa2g3496 302 SMART tha2 28 250 IPR001938 -
Psa2g3496 302 PIRSF PR5 1 288 IPR001938 -
Psa2g3496 302 SUPERFAMILY Osmotin, thaumatin-like protein 26 250 IPR037176 -
Psa2g3496 302 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Psa2g3496 302 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Psa2g3496 302 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Psa2g3496 302 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Psa2g3496 302 Gene3D Thaumatin 26 250 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3496 Psa-Chr2 384281683 384283600 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3496 7 251 Receptor kinase-like Gene Family AT5G38280 51.417 6.38e-88 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3496 - - gmx:100806478 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3496 2 384281683 384283600 Psa2g3496 2 384281683 384283600 ECH
Psa2g3496 2 384281683 384283600 Psa4g2340 4 189275662 189277696 ECH
Psa7g3973 7 328786295 328795947 Psa2g3496 2 384281683 384283600 ECH
Psa5g0300 5 21800593 21811509 Psa2g3496 2 384281683 384283600 ECH