Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2795 ATGAGAACAGGTAACTGCGCCGTCCACCAGGGTCTCACCGCAGAAGCTGCGGCCATCGTCAAGCAGGCCGTGACGCTCGCCAAGCGTCGCGGCCACGCCCAAGTCACCCCCCTTCACGTGGCCAACACCATGCTCGCCTCCGCCAGCGGCCTCCTTCGTTCGGCTTGCCTTCAATCCCATTCCCATCCTCTCCAGTGCAAGGCCTTGGAGCTTTGCTTCAATGTCGCCCTCAACCGCCTTCCGGCGTCCAACACCGCAGGCGCCATGTTAGGTCCCACCTCTCTCTACTCTCACTGCCCTTCCATCTCCAACGCCTTGGTGGCCGCCTTCAAGCGAGCCCAGGCCCACCAGCGCCGTGGATCCATCGAGAATCAGCAGCAGCCGCTGTTAGCCGTCAAGATAGAGCTGGAGCAGCTCATCATTTCCATCTTGGATGATCCTAGCGTCAGCCGAGTCATGAGAGAAGCTGGGTTCTCCAGCACTCAAGTCAAAAGTAATATCGAGCAAACTGTGTCCTTGGAAATATGTTCTCAAAAGGAACAAAACACTGCCACCAAAACATCGGTACCGATGGATCCGGTTAGGTCCGAGGATGTGTCGAGTGTGATAGGTTGTTTGGTGAATCAGAGAAGGAGAAGTACGGTGGTCGTGGGAGAGTGTGAGATCAGTCTTGAAGGTGTAGTACGAGGAGTGATGGATAGGGTTGAAAAGGACGATGCTGGTGAGGGTATGAGAGGGGTCAAGTTTGTTTCTCTTTCTCGTTCTGCTTTTGGGCATTTGTCCAAAGTAGAGGTGGAGAGCAAGATTGAAGAGCTCAAGAGCCTTGTTACGAACAGTCGTCATTGCAAAGGGTTTATTTTGTATGTGGGAGATCTTAAGTGGCTGTTCGAGTACAAAAGTCGTTGGAGCCAGCAAGGAAACGGGTGCTATTGCCCAGTGGAGCACATGATAGTGGAAGTGGGAAAGCTGGTGAGTGGAGAGAATAACAATGGAGGGTTGAGGTTGATGGGAATAGCTACTTTTCAAACTTACATGAGATGTAGAAATGGGCATCCATCGCTGGCGACTCTCTGGGGACTTCATCCTCTTACTATTCCTGCAGGAAGCTTGCACTTGAGTCTCGTTACTGACACTGACAGTGATCTACAAAATCAGTCCTCTAACAAGAAAGCTGAGGGCAATCGAACTGGCTGGCTGTTACCCGAACCAGGGGTAGAGAAGCAAGCGGCGGCTTGCTTGGCCGAGCCTTCTCCCAAGTTTGAGCTACAAGTTCGAAGTTTGCAGAGCAGTACCTGTAACAGTGACTCATCCCCAACTCTTCCTGCATGGCTCCAACAGTACAAACATGAGAGTAGAGCATCCTCCAATGATCAGAACTGTGTCCCAGTGGGAGGCCGCTGTAAAAAGTGGAATTCTTTGTGCAATAGTCCAATCCAGAAACAAACCTATCATTGTGAAAAAGCCTTCACATTCTCCCCTGTATCACCCTCTTCATCTCCTCCAGGCTTCTCATATAACCCGCCAAGAGACCAGCCTTTCTGGATCTCTGAAAGTGGCAATAGTAATAATAAGCCAAACGAACCAGCTCTGAGAATGTACATCCCAGATCATAACAGCGCCAAACAGTCATTCCCACCGTCCTATCCAAGTTCAAACCCTAATTCCACTTCATCTAGTGATCTCCTGGAAACGGAATATGTGAGCAGGTTCAAAGGGCTCACTTCAGAGAATTTCAATACCCTATGCAATGCCTTGGAGGAAAAAGTCCCGTGGCAGAAAGATATAGTACCGGACATCGTAAGCACCGTTTTACAGTGCCGGTCTGGCATGTTAAGAAGAAAAGAAAAGATCAGAAACATCGAGGTGAAGAAAGAAACGTGGTTGTTCTTCCAAGGAGTTGATGTGGAAGCCAAAGAAAAAATAGCCAGAGAACTAGCTACGAAAGTATTTGGGTCCCATAGCAATAACCTCGTTTCAATAGCTTTAAGTAGTTTTTCATCAACAGGGGCAGATTCAACAGAGGAATATGTCAGAAACAAAAGATCAAGAGACGAACGAAGTTATTACGTTGAGAGATTCGGGGATGCAGTTTCTAGCAATCCTCACAGGGTGTTTCTGCTGGAGGACATCGAGCAAGCGGATTATTGTTCTCAACTGGGTTTCAAAAGGGCTATTGAAAGAGGAAGAATAGTGGATTCAAATGGTAAAGAAATCAGCCTTTGTGATGCAATCATCATTTTCAGCTGTGAAAGTTTCAGCTCGAGGTCAAGACCGTGCTCTCCTCCGGTTAAGCAGAAGTTATTATCTGAAGCATCTGAAAAGAAGGATGATAGTATTGCTACTGTCGAGGAGACGAGCCCTTGGGTGTCTTTGGATTTGAACATATCTATTGATGATGACTGTGAGGAGGATCGCCTAGCGGGTTACATGGGGCTTCTTGAATCCGTAGACAGACGGATTGTCTTCAAAACTCGCCAGGAATTATGA 2487 0.4837 MRTGNCAVHQGLTAEAAAIVKQAVTLAKRRGHAQVTPLHVANTMLASASGLLRSACLQSHSHPLQCKALELCFNVALNRLPASNTAGAMLGPTSLYSHCPSISNALVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNIEQTVSLEICSQKEQNTATKTSVPMDPVRSEDVSSVIGCLVNQRRRSTVVVGECEISLEGVVRGVMDRVEKDDAGEGMRGVKFVSLSRSAFGHLSKVEVESKIEELKSLVTNSRHCKGFILYVGDLKWLFEYKSRWSQQGNGCYCPVEHMIVEVGKLVSGENNNGGLRLMGIATFQTYMRCRNGHPSLATLWGLHPLTIPAGSLHLSLVTDTDSDLQNQSSNKKAEGNRTGWLLPEPGVEKQAAACLAEPSPKFELQVRSLQSSTCNSDSSPTLPAWLQQYKHESRASSNDQNCVPVGGRCKKWNSLCNSPIQKQTYHCEKAFTFSPVSPSSSPPGFSYNPPRDQPFWISESGNSNNKPNEPALRMYIPDHNSAKQSFPPSYPSSNPNSTSSSDLLETEYVSRFKGLTSENFNTLCNALEEKVPWQKDIVPDIVSTVLQCRSGMLRRKEKIRNIEVKKETWLFFQGVDVEAKEKIARELATKVFGSHSNNLVSIALSSFSSTGADSTEEYVRNKRSRDERSYYVERFGDAVSSNPHRVFLLEDIEQADYCSQLGFKRAIERGRIVDSNGKEISLCDAIIIFSCESFSSRSRPCSPPVKQKLLSEASEKKDDSIATVEETSPWVSLDLNISIDDDCEEDRLAGYMGLLESVDRRIVFKTRQEL 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2795 828 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 824 - -
Prci3g2795 828 MobiDBLite consensus disorder prediction 496 531 - -
Prci3g2795 828 Gene3D - 9 172 IPR036628 -
Prci3g2795 828 MobiDBLite consensus disorder prediction 540 559 - -
Prci3g2795 828 Gene3D - 560 786 IPR027417 -
Prci3g2795 828 ProSiteProfiles Clp repeat (R) domain profile. 8 174 IPR004176 -
Prci3g2795 828 Pfam Clp amino terminal domain, pathogenicity island component 134 169 IPR004176 -
Prci3g2795 828 Pfam Clp amino terminal domain, pathogenicity island component 23 46 IPR004176 -
Prci3g2795 828 SUPERFAMILY Double Clp-N motif 12 168 IPR036628 -
Prci3g2795 828 Gene3D - 180 358 IPR027417 -
Prci3g2795 828 MobiDBLite consensus disorder prediction 511 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2795 Prci-Chr3 39970307 39973952 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2795 - - pcin:129304875 1600.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g2795 3 39970307 39973952 Prci2g1821 2 13428110 13433792 ECH
Prci3g2795 3 39970307 39973952 Prci3g2795 3 39970307 39973952 ECH
Prci3g2795 3 39970307 39973952 Prci8g0813 8 5231502 5237009 ECH
Prci3g2795 3 39970307 39973952 Prci2g3005 2 37570826 37575713 ECH