Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00933 ATGGCATTGTCATCATCACCATCCCTCTCCAAACTCTCTCTTCTGTTGTTCTTCTTCCTGTCACTTTCTTCTTCTTATGCTGCTTCCGACCCCTCTCATCACCCCGCCTACCTACCACAATCACATGCAGAAAGGCTCATAAGAAGCCTTAACGTATTTCCAAAGGACTCAGTTAACATTATAAAAGGTGACCATGGTGGTTTTGTCCATGGTAAGATCGTGGAGAAGAAGTTCTCGTTTCTTGGTGATTCTGGGCCATCTGTTGAAGACCTTGGTCACCATGCAGGCTATTATTCACTTCCTCATTCCAAAGCTGCCAGGATGTTCTACTTTTTCTTTGAATCACGGAACAGTAAGGATGATCCTGTTGTCATATGGTTGACTGGTGGACCAGGGTGTGGAAGTGAATTAGCTTTATTTTACGAAAATGGTCCTTTTCATATTACCAAAAACTTGTCTCTTACATGGAATGATTATGGCTGGGATCAGGCATCAAATATTATATTTGTTGACCAACCAACGGGGACAGGTTTTAGTTACTCTTCTGATGAGAGAGACATTCGCCACGATGAAACCGGCGTTAGCATTGATTTATATGATTTCTTGCAGGAGTTTTTCAAGACGCATCTTGATTTAGTTAACAATGACTTCTACATCTTTGGTGAATCATATGCTGGACACTATGTTCCTGCACTTGCATCTCGGGTTAACCAAGGAAATAAACAAAATCAAGGGCTTCATATAAACCTCAAGGGTTTTGCAATCGGTAATGGGTTAACCAATCCTGCAATTCAATTCCAAGCATACCCAGATTTTGCATTAGACAACAGAATAATTACAAAGGCTCAGTACGACAACGTCAGCATGTTAATCCCAGACTGTGAACAAGCCACTAAAACTTGCGAAGCTCAAGGTGGAAATAGTTGCATCAGAGCATTACATATTTGTGAAAACATTTTCGATCGTATCCTGGACTTTATCGACAACATTAATTACTATGACATCAGAAAGAAATGTGAGGGGCATTTGTGCTACAACTTCACAGAAGTGGAGACGTTGTTAAACATGCAGAAAGTGAAAAGTGCTTTGGGTGTGATGGATGACTTGAAGTATGAGTTATGCAATTTAGAAGTTCATGTGGCTATGATGCAAGACTGGATGAGAAACCTGGAAGTGGCTATTCCTGCTCTTCTTGAGGATGGAATCAAGTTGCTTGTGTATGCTGGTGAAGAAGATCTCGTATGCAATTGGCTTGGGAATTCAAGGTGGGTACAAGCCATGGAGTGGTCAGGCCAAAAGGCCTTTGGGATATCTCCTACAGGGAAATTTGTGGTTGATGGTGCCGAAGCAGGTTCTTTGAATAGCTTTGGACCTTTAACTTTTCTCAAGGTGCATGGGGCAGGGCACATGGTCCCTATGGATCAACCAAAAGCTGCACTTCAGATGTTGACAAGCTGGACTGGAGGGACACTGAATGCATCCTCTTCTCCAAGTTTTTCTCACCAGCTAAGATCAAGACCATTGATCATCTTCTTTATTCTCTTTCTTTATTGTACAATCACCAATCAAATGCTCAGATCTTGA 1584 0.4173 MALSSSPSLSKLSLLLFFFLSLSSSYAASDPSHHPAYLPQSHAERLIRSLNVFPKDSVNIIKGDHGGFVHGKIVEKKFSFLGDSGPSVEDLGHHAGYYSLPHSKAARMFYFFFESRNSKDDPVVIWLTGGPGCGSELALFYENGPFHITKNLSLTWNDYGWDQASNIIFVDQPTGTGFSYSSDERDIRHDETGVSIDLYDFLQEFFKTHLDLVNNDFYIFGESYAGHYVPALASRVNQGNKQNQGLHINLKGFAIGNGLTNPAIQFQAYPDFALDNRIITKAQYDNVSMLIPDCEQATKTCEAQGGNSCIRALHICENIFDRILDFIDNINYYDIRKKCEGHLCYNFTEVETLLNMQKVKSALGVMDDLKYELCNLEVHVAMMQDWMRNLEVAIPALLEDGIKLLVYAGEEDLVCNWLGNSRWVQAMEWSGQKAFGISPTGKFVVDGAEAGSLNSFGPLTFLKVHGAGHMVPMDQPKAALQMLTSWTGGTLNASSSPSFSHQLRSRPLIIFFILFLYCTITNQMLRS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00933 527 FunFam Carboxypeptidase 80 498 - -
Phco9g00933 527 Pfam Serine carboxypeptidase 90 488 IPR001563 GO:0004185|GO:0006508
Phco9g00933 527 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 87 476 IPR001563 GO:0004185|GO:0006508
Phco9g00933 527 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Phco9g00933 527 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Phco9g00933 527 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Phco9g00933 527 PRINTS Carboxypeptidase C serine protease (S10) family signature 459 472 IPR001563 GO:0004185|GO:0006508
Phco9g00933 527 Gene3D alpha/beta hydrolase 73 496 IPR029058 -
Phco9g00933 527 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Phco9g00933 527 ProSitePatterns Serine carboxypeptidases, histidine active site. 459 476 IPR033124 GO:0004185
Phco9g00933 527 SUPERFAMILY alpha/beta-Hydrolases 91 490 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00933 Phco-Chr9 7557226 7560078 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01409 2 43297614 43300546 Phco9g00933 9 7557226 7560078 ECH
Phco6g00421 6 3958086 3961224 Phco9g00933 9 7557226 7560078 ECH
Phco9g00933 9 7557226 7560078 Phco9g00933 9 7557226 7560078 ECH
Phco10g01475 10 37441595 37445044 Phco9g00933 9 7557226 7560078 PCT