Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01475 ATGGCATCATCATCGTCAAGGTTCCTCAACACATCTCTGTCTTTTATGTTCTTCTTCCTCATCTCCAATAACATTCCACCTTCTTTCTCCTCTCCAACTCACCCCACAACCAGTGAACTTAGTTTTTCTTCAACGGCAGAAAAACTCATAAGAGGGCTCAACCTGTTCCCTAAAGACCCCATTAACACACTAGAGAGTGACTCTCTTCTTGTGGCAGGAAACATTGTGGAGAAGAAGTTAACTTTTCCTAGCCTTGTTGCTCCAGGGTCTTCTGTTGAAGAACTTGGTCACCATGCAGGCTATTATAGTCTTCCTCGTTCCAAAGCTGCAAGGATGTTCTACTTTTTCTTTGAATCTCGAAACAGAAAGGATGATCCGGTTGTCATATGGTTGACTGGAGGACCAGGATGCAGCAGTGAACTAGCTTTGTTTTACGAAAATGGTCCTTTTCAGCTTACCAAGAACTTGTCTCTTGTGTGGAATGACTATGGTTGGGACAAGGCATCAAATATTATATTTGTTGATCAACCCACTGGAACGGGGTTCAGCTATACTTCTGATGAGAGTGACATTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTGCAGGCATTTTTCAAGGAGCATCCTCAATTCACTAAGAATGACTTTTATATTACTGGAGAGTCATATGCTGGACACTACATTCCAGCTCTTGCATCCAGGGTTCACCAAGGAAACAAAGCAAAAGAAGGAATTCATATAAATCTAAAGGGTTTTGCTATTGGTAATGGGTTAACCAATCCTGAAATTCAGTACCAGGCGTATACAGACTATGCATTAGACAGAGGACTGATTGAAAAGGCTGATTATAATAGCATCAACAAGTTGCTCCCATCATGCAAGCAGGCCATAGAAGCTTGCGGCACTGAAGGTGGAGAAACCTGTGAAACTTCATTATATGTTTGCAATAAGATATTCAATCGGATAATGAACATTGCTGGAGATGTTAATTACTATGACATTAGAAAGAAATGTGTGGGAGATCTGTGCTATGACTTCTCTGAGATGGAGGAATTCTTAAACAAGAAGACAGTGAGAGATGCTTTAGGTGTTGGGGAGTTGGACTTCGTTTCATGCAGTAGCACAGTGTATAGTGCCATGATGCAAGACTGGATGAGAAATCTAGAAGTGGGTATTCCGGCACTCCTCGAGGATGGAATCAAGGTGCTTGTGTATGCTGGAGAAGAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGTTCAAGCAATGGAGTGGTCTGGTCAAAAAGAATTTGGGGCGTCTGGTACAGTCCCATTTTTGGTGGATGGTGCAGAAGCAGGCTTGCTGAAAAGCCATGGACCTCTCGCTTTCCTGAAGGTATACGAGGCTGGTCACATGGTGCCTATGGATCAACCAAAAGCTGCACTTACAATGCTAAGAAGCTGGATGCAAGGGAAACTGACAATGACAAAGAATGGGGATAATGTCTCTCCAAAATGA 1521 0.4267 MASSSSRFLNTSLSFMFFFLISNNIPPSFSSPTHPTTSELSFSSTAEKLIRGLNLFPKDPINTLESDSLLVAGNIVEKKLTFPSLVAPGSSVEELGHHAGYYSLPRSKAARMFYFFFESRNRKDDPVVIWLTGGPGCSSELALFYENGPFQLTKNLSLVWNDYGWDKASNIIFVDQPTGTGFSYTSDESDIRHDEEGVSNDLYDFLQAFFKEHPQFTKNDFYITGESYAGHYIPALASRVHQGNKAKEGIHINLKGFAIGNGLTNPEIQYQAYTDYALDRGLIEKADYNSINKLLPSCKQAIEACGTEGGETCETSLYVCNKIFNRIMNIAGDVNYYDIRKKCVGDLCYDFSEMEEFLNKKTVRDALGVGELDFVSCSSTVYSAMMQDWMRNLEVGIPALLEDGIKVLVYAGEEDLICNWLGNSRWVQAMEWSGQKEFGASGTVPFLVDGAEAGLLKSHGPLAFLKVYEAGHMVPMDQPKAALTMLRSWMQGKLTMTKNGDNVSPK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01475 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Phco10g01475 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 173 IPR001563 GO:0004185|GO:0006508
Phco10g01475 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 184 IPR001563 GO:0004185|GO:0006508
Phco10g01475 506 PRINTS Carboxypeptidase C serine protease (S10) family signature 209 234 IPR001563 GO:0004185|GO:0006508
Phco10g01475 506 Pfam Serine carboxypeptidase 94 492 IPR001563 GO:0004185|GO:0006508
Phco10g01475 506 SUPERFAMILY alpha/beta-Hydrolases 97 493 IPR029058 -
Phco10g01475 506 FunFam Carboxypeptidase 84 502 - -
Phco10g01475 506 ProSitePatterns Serine carboxypeptidases, serine active site. 223 230 IPR018202 GO:0004185
Phco10g01475 506 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 93 479 IPR001563 GO:0004185|GO:0006508
Phco10g01475 506 Gene3D alpha/beta hydrolase 76 504 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01475 Phco-Chr10 37441595 37445044 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01475 10 37441595 37445044 Phco10g01475 10 37441595 37445044 ECH
Phco10g01475 10 37441595 37445044 Phco9g00933 9 7557226 7560078 PCT
Phco9g00934 9 7561472 7564240 Phco10g01475 10 37441595 37445044 PCT