Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01409 ATGCTACCTCAGTCATTTACTATGATTGCAACAATAATTATTGTTCTTGCACAAACATTTGTGGGAGTGAGTTCACTTCCTGAATCTGATAAAATAAGCAATTTGCCGGGGCAACCTCAGGTCAAATTTCAGCAATATTCTGGCCATATTACTGTGGATGATCAGCACCAGAGAGCATTGTTTTACTACTTTGTTGAAGCAGAAGAAGACCCTGCTTCCAAGCCATTAGTCCTGTGGTTGAATGGAGGGCCCGGTTGTTCATCGATTGGAGTTGGAGCTTTTGCTGAGCATGGCCCTTTCAGACCGAGTGACAACAATGTTCTTGAGAAAAATGATTACAGTTGGAACAAAGAGGCAAATGTGCTATACTTGGAGTCACCAGCTGGTGTTGGATTCTCTTACTCTAGCAATAAATCGTTCTATGTATTAGTGACAGATGAAATTACAGCCAGGGATAATCTTGTGTTCCTACAGCGTTGGTTCACTAAATTTCCTGAGTACTCAAATAACGACTTCTTCATTACTGGGGAGAGCTATGGAGGTCACTATGTTCCGCAACTTGCACAACTTATTGTTCAAACCAAGACCCACTTCAATCTCAAGGGGATAGCAATAGGGAATCCTCTTCTGGAGTTCAATACTGATTTCAACGCCAGATCTGAGTATTTTTGGTCTCACGGACTGATATCAGATTCAACATTCGAAATCCTAACTAGAGTCTGCAACTATTCCTCAATTAGGAGACAACGTCAAAATGGGAATCTTGGAGGGGTTTGTGAAAGAGCAAGCAAGCAATTGTATGCTGAGGTTAGCGACTATGTAGATGAATATGATGTCACTCTGGATGTTTGTTTGTCATCAGTAAATCAACAGGCTTATGTGCTGCATCAACTGCAAGAGACACAAAAGATAGATGTTTGTGTTGGTGATAAAACGACCACATACTTGAACAGGAAAGAAGTCCAAGAAGCTCTACATGCTAAACTTGTAGGAGTCACCAAATGGTCAACTTGCAGTTCAGTTCTGCATTATGACTATAGGAATCTAGAAATACCAACAATTCCTATCCTAGGGTCACTTGTTAAGTCTGGCATCAGGGTCCTGGTATACAGTGGTGATCAAGACTCAGTGATTCCATTAATAAGTTCGAGATATCTAGTGAACGGATTAGCCAAGGAAATTGGACTTGAGACAACAGTGGCCTATAGAGCCTGGTTTGAGGAAAAACAGGTAGCAGGATGGACACAAACATATGGGGACATGTTATCATATGCCACCATAAGAGGAGCATCTCATGAAGCTCCCTTTACTCAACCTCAAAGATCACTAGTGCTACTCAAAGCATTTCTAGAAGGAAAGCAACTGCCTAGTGTTAAATGA 1380 0.413 MLPQSFTMIATIIIVLAQTFVGVSSLPESDKISNLPGQPQVKFQQYSGHITVDDQHQRALFYYFVEAEEDPASKPLVLWLNGGPGCSSIGVGAFAEHGPFRPSDNNVLEKNDYSWNKEANVLYLESPAGVGFSYSSNKSFYVLVTDEITARDNLVFLQRWFTKFPEYSNNDFFITGESYGGHYVPQLAQLIVQTKTHFNLKGIAIGNPLLEFNTDFNARSEYFWSHGLISDSTFEILTRVCNYSSIRRQRQNGNLGGVCERASKQLYAEVSDYVDEYDVTLDVCLSSVNQQAYVLHQLQETQKIDVCVGDKTTTYLNRKEVQEALHAKLVGVTKWSTCSSVLHYDYRNLEIPTIPILGSLVKSGIRVLVYSGDQDSVIPLISSRYLVNGLAKEIGLETTVAYRAWFEEKQVAGWTQTYGDMLSYATIRGASHEAPFTQPQRSLVLLKAFLEGKQLPSVK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01409 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Phco2g01409 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Phco2g01409 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Phco2g01409 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Phco2g01409 459 FunFam Carboxypeptidase 353 452 - -
Phco2g01409 459 Gene3D - 307 343 - -
Phco2g01409 459 Gene3D - 353 452 - -
Phco2g01409 459 SUPERFAMILY alpha/beta-Hydrolases 33 455 IPR029058 -
Phco2g01409 459 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Phco2g01409 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 439 IPR001563 GO:0004185|GO:0006508
Phco2g01409 459 FunFam Carboxypeptidase 25 456 - -
Phco2g01409 459 Pfam Serine carboxypeptidase 36 452 IPR001563 GO:0004185|GO:0006508
Phco2g01409 459 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Phco2g01409 459 Gene3D alpha/beta hydrolase 27 286 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01409 Phco-Chr2 43297614 43300546 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01409 2 43297614 43300546 Phco9g00933 9 7557226 7560078 ECH
Phco2g01409 2 43297614 43300546 Phco2g01409 2 43297614 43300546 ECH