Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0799 ATGTCTTCTGCTGGTGTAACTATTCTGAGTCCTGTTTCAAGGGAGAAATTGTTGTCTCCAACCAATGGATTATGTAATCCGCTGCACTTGTCTTCGAATCTTCATGATTTTATTTTCGTTTATCTTTCGTATTCGGGGTCTTTGTCTCCGATGCGTGTGCTACCTTCGGATACAATCGAGTCCGTAAAGCTCAAAATTCAAAGGAATGAAGGGGTGACAAACAAACAGAAGTTGGTTTGTAATGGCCGTGAGTTGTCGCGTAGCAATTCTTTACTCAAGGATTATGGGGTTACAGAAGGGAATGTTTTGCATTTGGTGATTCGACTGGCAGATCTACAGACCATCAGTGTGAGAACTTGTTCCGGGAAGGAGTATTCCTTTCAGGTTGAAAGGTGTAAGGATGTTTGGTATGTTAAGAAACAGATTGCGGAAAAGGAAAAAGAGTTTGCTGATCCTGAGCAGCAGGAGGTTGTGTGTAACGGGGAGCTGCTTGATGATCAGAAGCTTATTGATGATATCTGTAGCAATTATAATGATGCAGTTATACATCTTTTTGTTAGAACAAAATATGCGGATGTTAGTACAGGGCTTGATGAGTTGTCTATTGAAGCAAAAGAATTGAATGATTCGAAGAATTCTGATGCCAAGGAAGCTGATTACGTGAGGAAATATGATAGCGAAGAAGATGCGAGAAAGGAGTATGAAGCTATCGAACGAATTATGTCGAGAAAAGCTCCTGGTGGAGGTCTTGTTTTGGAGCCGGTTATTGTTAACCCTAAAGTTGAACTAGCTTCAGAGGTTTGGGATATGATAAACACTACATATGATGGGCTAGATAGTGGTAATTCTCCAATCAGATCTGCAGAGGGTACAGGTGGGGCTTACTTTATGCTCGACTCAACAGGGCAAAAATATGTATCGGTTTTCAAGCCTATGGATGAAGAGCCGATGGCTGTGAATAACCCTAGAGGTTTACCTTTGTCGTTAGACGGCCAGGGCTTAAAAAAGGGTACAAGAGTTGGCCAAGGAGCTTTCAGGGAAGTTGCTGCTTATATTTTGGATCATCCAATGAGTGGCCGCCGATCATTATTTGGTGATGAGAAAGGATTTGCTGGTGTTCCTCCGACTGTTATGGCTAAGTGCTTGCACAAAGCATTTAACCATCCAGAGGGTTTGACTGCTAAGTTTGGTTCCTTGCAAATGTTCGTGGAGAATAATGGAAGTTGTGAGGATATGGGACCTGGCGCTTTTCCGGTGAAGGAAGTGCATAAAATTACTGTGCTGGACATGAGACTTGCAAATGCAGATAGGCATGCTGGGAATATTTTGCTTGGCAAAGAGAAGAAAAATGGCCAGGCTGTTTTGATTCCAATTGATCATGGATACTGCCTTCCCACTAGTTTTGAAGATTGTACCTTTGAATGGCTTTATTGGCCTCAAGCTCGCCAGCCATACTCTCCAGAGATCATTGACTACATAAAGTCACTTGATGCTGAAGAAGATATTGCCCTTCTGAAGTTTCATGGATGGGATCTGCCACTCGAATGTGCCCGCACTCTCCGAATCTCGACCATGCTTCTGAAAAAAGGAGTGGGGAAAGGGATGACCCCTTTTGCCATTGGAAGCCTGATGTGCCGAGAATCGTTGAACAAAGAGTCTGTGATTGAAGGAATTTTTAAAGCAGCACTTGATTCTGTTCTTCCTGGTACTAGTGAAGCTACTTTTATGGATGCTGTTTCTGAGATTATGGACCAGCACCTTGATGAGATCACCAGCAATTATAATTCTTAA 1791 0.426 MSSAGVTILSPVSREKLLSPTNGLCNPLHLSSNLHDFIFVYLSYSGSLSPMRVLPSDTIESVKLKIQRNEGVTNKQKLVCNGRELSRSNSLLKDYGVTEGNVLHLVIRLADLQTISVRTCSGKEYSFQVERCKDVWYVKKQIAEKEKEFADPEQQEVVCNGELLDDQKLIDDICSNYNDAVIHLFVRTKYADVSTGLDELSIEAKELNDSKNSDAKEADYVRKYDSEEDARKEYEAIERIMSRKAPGGGLVLEPVIVNPKVELASEVWDMINTTYDGLDSGNSPIRSAEGTGGAYFMLDSTGQKYVSVFKPMDEEPMAVNNPRGLPLSLDGQGLKKGTRVGQGAFREVAAYILDHPMSGRRSLFGDEKGFAGVPPTVMAKCLHKAFNHPEGLTAKFGSLQMFVENNGSCEDMGPGAFPVKEVHKITVLDMRLANADRHAGNILLGKEKKNGQAVLIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSPEIIDYIKSLDAEEDIALLKFHGWDLPLECARTLRISTMLLKKGVGKGMTPFAIGSLMCRESLNKESVIEGIFKAALDSVLPGTSEATFMDAVSEIMDQHLDEITSNYNS* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0799 596 Pfam Phosphatidylinositol 3- and 4-kinase 290 539 IPR000403 -
Mtr8g0799 596 ProSiteProfiles Ubiquitin domain profile. 38 108 IPR000626 GO:0005515
Mtr8g0799 596 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 281 574 IPR000403 -
Mtr8g0799 596 SUPERFAMILY Protein kinase-like (PK-like) 428 593 IPR011009 -
Mtr8g0799 596 SUPERFAMILY Ubiquitin-like 108 188 IPR029071 -
Mtr8g0799 596 Gene3D - 36 112 - -
Mtr8g0799 596 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 594 - -
Mtr8g0799 596 ProSiteProfiles Ubiquitin domain profile. 113 172 IPR000626 GO:0005515
Mtr8g0799 596 Pfam Ubiquitin family 115 188 IPR000626 GO:0005515
Mtr8g0799 596 Pfam Ubiquitin family 44 109 IPR000626 GO:0005515
Mtr8g0799 596 SUPERFAMILY Ubiquitin-like 28 110 IPR029071 -
Mtr8g0799 596 SMART ubq_7 113 187 IPR000626 GO:0005515
Mtr8g0799 596 SMART ubq_7 38 108 IPR000626 GO:0005515
Mtr8g0799 596 PRINTS Ubiquitin signature 47 67 IPR019956 -
Mtr8g0799 596 PRINTS Ubiquitin signature 89 110 IPR019956 -
Mtr8g0799 596 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 594 IPR044571 -
Mtr8g0799 596 Coils Coil 197 217 - -
Mtr8g0799 596 CDD Ubl_ubiquitin_like 115 185 - -
Mtr8g0799 596 Gene3D - 113 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0799 Mtr-Chr8 9918847 9922110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0799 1 593 Acyl Lipid Metabolism Gene Families AT5G24240 55.224 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0799 - - gmx:100815111 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0799 8 9918847 9922110 Mtr8g0799 8 9918847 9922110 ECH
Mtr8g0799 8 9918847 9922110 Mtr7g3875 7 55561978 55565099 ECH
Mtr5g0230 5 2121699 2125186 Mtr8g0799 8 9918847 9922110 ECH
Mtr8g3562 8 46190881 46193282 Mtr8g0799 8 9918847 9922110 ECH
Mtr7g3875 7 55561978 55565099 Mtr8g0799 8 9918847 9922110 PCT