Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2821 ATGTCAAAACAAACATACAGTGTTTGTTTATGCTGGCGTAGAAGATTCAAGCTAGCTTTATCAGAAGCACCACAAGAGATCAAGACCCTCTTTGAACAATACTCAGAAAATGATCTCATGACACCTTCAAACCTCAAAAGATTCTTAATTGAAATACAAAAACAAGAACAAGCTACTGAAGAAGAAGCACAAGCTATCATTGATAGTTTCAAGCATTTTCATAGAAGGGGTGCTGGACTTAATCTTGAAACTTTTTTCAAGTTTCTCTTTAGTGATAGTAACCTTGCTCTTTTACCTTCAATTGGGGTGCACCATGATATGACATTGCCCTTGTCTCATTATTTCATATATACTGGTCACAATTCCTATCTAACCGGGAATCAGCTGAGCAGCGACTGCAGCGACATTCCAATCGTGAAAGCGTTGCAGAGAGGTGTAAGGGTAATTGAGTTGGACTTATGGCCTAATGCATCCAAGGATAATGTTGATGTTCTTCATGGAAGGACATTGACTACTCCCGTGGAGCTCATTAGATGCTTGAGGTCTATTAAGGAACATGCCTTCGTCGCATCAGAATTTCCGGTTGTAATAACCCTAGAAGACCATCTTACTCCAGATCTTCAAGCCAAAGTGGCCGAGATGGTTACTTCAACATTTGGAGACATACTATTTGTACCTGGCTCAGAAAGCTTGAAGGAATTTCCTTCTCCTGAATCACTTAAAAAGAGGATTATTATATCAACCAAACCACCTAAGGAGTACCTTGAGACAAAAGAAGTAAAGGAAAAAGAGGATGATTCACTGCACGGAAAGGCTTCGGGCGACGATGAAGCGTGGGGGACGGAGATCCCGAGCTTCAAGTTAGGTTTGTTATCCGATTACAAGGGAAACAGTTTGGATAAAGAATATTTTCATGACGAGGAAGAGCTTTCCGAATCAGACAAGTCACATCACAACGTAGCTCCAGAATATAAAGGTTTAATTGCCATTCATGCTGGGAAGTCGAAAGGAGGAATAGACGCATGGCTCAAAATAGATCCGGAGAAAGCGAGGCGTATAAGTTTAAGTGAGCAACAGCTTGAAAAGGCTGCTATAACTCATGGAAAAGAAGTTGTCAGGTTTACTCAGAAGAATATTCTGAGGGTGTTTCCAAAAGGTACTCGCATTGACTCGTCAAATTATAATCCATTAATTGGGTGGATTCATGGAGCTCAAATGGTTGCATTCAACATGCAGGGATATGGGAGATCACTTTGGTTGATGCATGGAATGTTTAGAGCCAATGGAGGGTGTGGTTATGTTAAAAAACCAGATTTTCTCTTAACAACTGGTCCGGATAACGAGGTCTTTGATCCTAAAGCTAAGTTACCTGTGAAGACTACTTTGAAGGTGACTGTATATATGGGAGAAGGATGGTATTATGATTTCAAACATACACACTTTGATCAATATTCACCTCCAGATTTCTATGCAAGAGTTGGGATTGCTGGAGTCCCTAGTGATAGTATAATGAAAAAAACAAGGGCAATAGAGGATAATTGGCTGCCTACATGGAACGAGGTATTTGAGTTCCCGCTTACTGTTCCGGAACTAGCCCTTCTTCGTATAGAAGTTCACGAGTATGACATGTCCGAGAAAGATGATTTTGGTGGCCAAACATGCCTACCTGTTTCGGAGCTAAGGAGCGGCGTTCGAGCAGTTTCCCTGCATAGCCAGAAGGGAGATAAATACAATTCTGTAAAGCTTCTTATGCGCTTTGAATTTCATTGA 1770 0.4096 MSKQTYSVCLCWRRRFKLALSEAPQEIKTLFEQYSENDLMTPSNLKRFLIEIQKQEQATEEEAQAIIDSFKHFHRRGAGLNLETFFKFLFSDSNLALLPSIGVHHDMTLPLSHYFIYTGHNSYLTGNQLSSDCSDIPIVKALQRGVRVIELDLWPNASKDNVDVLHGRTLTTPVELIRCLRSIKEHAFVASEFPVVITLEDHLTPDLQAKVAEMVTSTFGDILFVPGSESLKEFPSPESLKKRIIISTKPPKEYLETKEVKEKEDDSLHGKASGDDEAWGTEIPSFKLGLLSDYKGNSLDKEYFHDEEELSESDKSHHNVAPEYKGLIAIHAGKSKGGIDAWLKIDPEKARRISLSEQQLEKAAITHGKEVVRFTQKNILRVFPKGTRIDSSNYNPLIGWIHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPDFLLTTGPDNEVFDPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYARVGIAGVPSDSIMKKTRAIEDNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELRSGVRAVSLHSQKGDKYNSVKLLMRFEFH* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2821 589 Gene3D C2 domain 456 589 IPR035892 -
Mtr5g2821 589 SUPERFAMILY EF-hand 17 106 IPR011992 -
Mtr5g2821 589 SMART plcy_3 324 441 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mtr5g2821 589 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 352 439 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mtr5g2821 589 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 354 440 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mtr5g2821 589 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 461 588 IPR035892 -
Mtr5g2821 589 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 105 249 - -
Mtr5g2821 589 SUPERFAMILY PLC-like phosphodiesterases 105 441 IPR017946 GO:0006629|GO:0008081
Mtr5g2821 589 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 2 588 IPR001192 GO:0035556
Mtr5g2821 589 ProSiteProfiles C2 domain profile. 442 571 IPR000008 -
Mtr5g2821 589 CDD PI-PLCc_plant 104 428 - -
Mtr5g2821 589 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 2 588 - -
Mtr5g2821 589 Pfam C2 domain 462 564 IPR000008 -
Mtr5g2821 589 SMART C2_3c 461 569 IPR000008 -
Mtr5g2821 589 SMART plcx_3 105 249 IPR000909 -
Mtr5g2821 589 Gene3D Phosphatidylinositol (PI) phosphodiesterase 102 454 IPR017946 GO:0006629|GO:0008081
Mtr5g2821 589 CDD C2_PLC_like 459 588 - -
Mtr5g2821 589 Pfam Phosphoinositide-specific phospholipase C, efhand-like 25 71 IPR015359 -
Mtr5g2821 589 Pfam Phosphatidylinositol-specific phospholipase C, X domain 107 249 IPR000909 -
Mtr5g2821 589 Gene3D - 22 100 - -
Mtr5g2821 589 PRINTS Phospholipase C signature 110 128 IPR001192 GO:0035556
Mtr5g2821 589 PRINTS Phospholipase C signature 136 156 IPR001192 GO:0035556
Mtr5g2821 589 PRINTS Phospholipase C signature 233 250 IPR001192 GO:0035556
Mtr5g2821 589 PRINTS Phospholipase C signature 379 400 IPR001192 GO:0035556
Mtr5g2821 589 PRINTS Phospholipase C signature 400 418 IPR001192 GO:0035556
Mtr5g2821 589 PRINTS Phospholipase C signature 555 565 IPR001192 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2821 Mtr-Chr5 36746634 36752163 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2821 1 588 Acyl Lipid Metabolism Gene Families AT3G55940 66.330 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2821 K05857 - gmx:547864 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2165 3 35193625 35198368 Mtr5g2821 5 36746634 36752163 ECH
Mtr5g2398 5 31392374 31397588 Mtr5g2821 5 36746634 36752163 ECH
Mtr5g2821 5 36746634 36752163 Mtr5g2821 5 36746634 36752163 ECH
Mtr3g2166 3 35200654 35204813 Mtr5g2821 5 36746634 36752163 PCT