Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2166 ATGTCTTCTAAACCGAAAAAACAAACATACAGCGTATGTTTCTGCTGCCGGCGCCGGTTTAAACTCGGCGTATCAGAGGCACCGCCGGAAATAAAAGAGCTTTACCATCGTTACTCCGATGAAGGCGGGATCATGACAGCATCCCACCTGAGAAGCTTTCTGATTGAGGTGCAGAAAGAAGAGAAGATCACAGAAGAAGAAACACAAGCAATCATTGATGGTCATAAACATTTGAGTATCTTTCATCGTAAAGGTCTTAATCTTGAAAGTTTCTTCAAGTTTCTCTTCGGTGATACTAATCCTCCTCTTTTACCTTCCACTGGGGTGCACCAAGATATGAGTTTACCATTGTCACATTATTACATATTCACTGGTCATAATTCATATCTAACTGGAAATCAGCTTAGTAGTGACTGCAGTGATGCCCCCATCATCAAAGCACTTCAGAGAGGTGTTAGGGTGATTGAATTGGATATATGGCCTAATGACTCCAAGGATGATGTTGATGTCCTTCATGGAATGACATTGACGACTCCTGTGGCACTTATCAAATGTTTGATGTCTATTAAGGAGTATGCCTTCGTTGCGTCTGAATATCCGGTTGTAATAACCTTAGAAGACCATCTTACTCCTGATCTTCAGGCCAAAGTGGCTCAGATGGTTACTCAAACATTTGGAGACATACTGTTTTGTCCTACCTCAGAAACCTTGAAGGAATTTCCTTCACCTGATTCACTTAAAAAAAGGATTATCATATCAACCAAGCCACCTAAGGAGTACCTTGAAGCTAAAGAAGAAAAGGAAAAGGAGGAATCACAGAAGGGAAAGCCTTTAGGTGATGAAGAAGCTTGGGGCAAAGAAGTCCCAAGTTTAAGAGGCGGTACTATAGCTGATTACAAGCAAAACAGTGGTATCGATGAAGATGATCTTAAGGAGGAGGAAGATTCCGATGAAGCGTCACGGCAAAATACATCAGATGACTACAGACGCTTAATTGCTATACATGCTGGGAAGCCTAAAGGTGGAATAGTGGAATGTCTCAAAGTGGAGCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGTCACAGCTTGAAAAGGCTGCTGAAACATACGGAAAAGAAATTGTCAGGTTCACTCAGCAGAATATATTGCGAGTGTATCCGAAAGGTACACGCATTACCTCATCAAATTATAATCCATTAATTGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGTTATGGGAGATCTCTTTGGTTGATGCAAGGAATGTTTAAAGCCAATGGAGGATGCGGTTTTGTTAAAAAACCAGATTTTCTATTAAAAACTGGTCCCAATAATGAGATTTTCGATCCTAAAGCTAATTTGCCATCGAAAACTACTTTGAAGGTGACTGTATACATGGGAGAAGGATGGTATTATGATTTCAAGCATACACATTTTGATCAGTTCTCACCTCCAGACTTCTATGCAAGGGTTGGAATCGCTGGAGTCCCTTTTGACACTGTTATGAAAAAAACAAAGTCAATAGAGGATAGTTGGTTGCCTTCTTGGAATGAGGTATTTGAATTCCCGCTTTCCGTTCCGGAGCTGGCACTGCTTCGCATAGAAGTTCATGAGTATGACATGTCTGAGAAGGATGATTTTGGTGGACAAACATGCTTGCCTGTGTGGGAACTAAGAAGCGGAATTCGAGCAATTCCATTACATTCCCGCAAAGGAGATAAATACAACAATGTAAAGCTTCTCATGCGCTTTGAGTTCATCTGA 1782 0.4119 MSSKPKKQTYSVCFCCRRRFKLGVSEAPPEIKELYHRYSDEGGIMTASHLRSFLIEVQKEEKITEEETQAIIDGHKHLSIFHRKGLNLESFFKFLFGDTNPPLLPSTGVHQDMSLPLSHYYIFTGHNSYLTGNQLSSDCSDAPIIKALQRGVRVIELDIWPNDSKDDVDVLHGMTLTTPVALIKCLMSIKEYAFVASEYPVVITLEDHLTPDLQAKVAQMVTQTFGDILFCPTSETLKEFPSPDSLKKRIIISTKPPKEYLEAKEEKEKEESQKGKPLGDEEAWGKEVPSLRGGTIADYKQNSGIDEDDLKEEEDSDEASRQNTSDDYRRLIAIHAGKPKGGIVECLKVEPDKVRRLSLSESQLEKAAETYGKEIVRFTQQNILRVYPKGTRITSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFKANGGCGFVKKPDFLLKTGPNNEIFDPKANLPSKTTLKVTVYMGEGWYYDFKHTHFDQFSPPDFYARVGIAGVPFDTVMKKTKSIEDSWLPSWNEVFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVWELRSGIRAIPLHSRKGDKYNNVKLLMRFEFI* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2166 593 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 465 592 IPR035892 -
Mtr3g2166 593 MobiDBLite consensus disorder prediction 261 324 - -
Mtr3g2166 593 Gene3D Phosphatidylinositol (PI) phosphodiesterase 108 458 IPR017946 GO:0006629|GO:0008081
Mtr3g2166 593 SMART plcy_3 328 445 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mtr3g2166 593 Gene3D - 26 104 - -
Mtr3g2166 593 SUPERFAMILY EF-hand 21 113 IPR011992 -
Mtr3g2166 593 ProSiteProfiles C2 domain profile. 446 575 IPR000008 -
Mtr3g2166 593 Gene3D C2 domain 459 593 IPR035892 -
Mtr3g2166 593 CDD C2_PLC_like 463 592 - -
Mtr3g2166 593 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 111 255 - -
Mtr3g2166 593 SMART plcx_3 111 255 IPR000909 -
Mtr3g2166 593 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 357 443 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mtr3g2166 593 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 6 593 IPR001192 GO:0035556
Mtr3g2166 593 MobiDBLite consensus disorder prediction 261 287 - -
Mtr3g2166 593 Pfam C2 domain 466 566 IPR000008 -
Mtr3g2166 593 Pfam Phosphatidylinositol-specific phospholipase C, X domain 113 255 IPR000909 -
Mtr3g2166 593 PRINTS Phospholipase C signature 116 134 IPR001192 GO:0035556
Mtr3g2166 593 PRINTS Phospholipase C signature 142 162 IPR001192 GO:0035556
Mtr3g2166 593 PRINTS Phospholipase C signature 239 256 IPR001192 GO:0035556
Mtr3g2166 593 PRINTS Phospholipase C signature 383 404 IPR001192 GO:0035556
Mtr3g2166 593 PRINTS Phospholipase C signature 404 422 IPR001192 GO:0035556
Mtr3g2166 593 PRINTS Phospholipase C signature 559 569 IPR001192 GO:0035556
Mtr3g2166 593 SMART C2_3c 465 573 IPR000008 -
Mtr3g2166 593 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 358 444 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mtr3g2166 593 CDD PI-PLCc_plant 110 432 - -
Mtr3g2166 593 Pfam Phosphoinositide-specific phospholipase C, efhand-like 30 75 IPR015359 -
Mtr3g2166 593 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 593 - -
Mtr3g2166 593 SUPERFAMILY PLC-like phosphodiesterases 111 446 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2166 Mtr-Chr3 35200654 35204813 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2166 7 593 Acyl Lipid Metabolism Gene Families AT3G55940 65.943 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2166 K05857 - gmx:100784534 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2166 3 35200654 35204813 Mtr5g2821 5 36746634 36752163 PCT