Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2398 ATGGGAAGTTATAGAGTCTGCGTGTGTTTCCGGCGGAGGTTTAAGTCCGGGGAGGCAGTGGCGCCTCAGGAAGTCAGGGAGATCTTCAACAAGTATGCTGAAGGTGGGGCCCACATGACTCCGGAACAGCTCCGGAGGTTTCTTGTGGAGGTTCAAGGTGAGGTTGATGATGAGAAGGATGGACTTGATACACAGAAGGTGGTGGAGGAAGTGTTGCAGAAGCGGCATCATATTACGAAGTTTGCAAGACATAATCTCACGCTTGAAGATTTTCATCATTATCTATTCTCTACTGAATTCAACCCTCCTATTAGATCTAAGGTTCATCAGGATATGACAGCTCCATTGTCGCATTATTTTATATATACTGGCCATAACTCTTATCTCACTGGAAATCAACTCAGCAGTGATTGTAGTGATATCCCCATTATAAAGGCATTGCATAGAGGTGTGAGAGTGGTTGAGCTTGATATTTGGCCTAATTCCACCAAAGATGATGTTCTTGTGCTACATGGAAGGACATTGACCACACCTGTTGATTTGATCAAATGTTTGAAATCCATTAAGGAACACGCGTTCTCGGCATCTCCGTACCCAGTTGTAATAACTCTGGAAGATCATCTTACCTCAGACCTTCAAGCAAAAGCTGCTCAGATGATTACTCAAACATTTGGAGATATGCTGTTCTGTCCAAATGATGAAAATTTAAACAATATTCCATCACCTGAAGAATTGAAGTATAGGATCATGATATCAACAAAACCTCCAAAAGAGTACTTAAATTCCAAAAGTGTTAGGGAGAATTCTGAACAATTGCTGAAATCAAAATCAAAGGATTCTGATGAAGACGAATGGGGAAAGGAAGTCACTGATGTTGTACATGCACAAAATGAAGACGACAAGGGTGACTGTGACTCACATCAACAGAATGATGATGATGATGAATCAAATGATGATGAATATGAAACAAATCACGAGAGTGAGTATAAGCGTCTAATCGCTATTCATGCTGGAAAACCTAAGGGTAGTTTGAAGGAAGCCTTAAAAGTTGAAGAAGATAAAGTGAGACGCCTTAGCTTAAGTGAACAAGCTCTTGAGAAGGCTGCTGAGTCGCTCGGAACTGATCTTATTAGGTTCACCCAGAAAAACTTTTTGAGGATATATCCGAAGGGTACACGTGTCACCTCGTCGAACTACAAGCCACTGATTGGCTGGATGCATGGTGCTCAAATGGTTGCATTCAATATGCAAGGATATGGCAGAAATCTTTGGTTGATGCATGGAATGTTTAGATCCAATGGGGAATGTGGTTATGTGAAAAAACCAGACTTTCTAATGAATGTAGGTCCAAATAATGAGGTATTCAATCCTAAAGATAAGTTGGAAGTGAAGAAGACGCTTAAGGTTAAAATATATGTGGGAGATGGATGGAGTATGGATTTCAAACAAACTCACTTTGACTCATATTCTCCACCAGATTTTTATGCCAGGGTTGGCATAGCTGGAGTGCCGGCTGATGTAACAATGAAGAAAACAAAGACAATAGAGGATAACTGGATACCTACTTGGGAAGAAGAATTCACCTTCCCTTTAACTGTGCCTGAACTTGCTTTGCTTAGAGTGGAAGTACATGAATATGACATGTCTGAGACAGATGATTTTGCTGGCCAAACTTGTTTACCAATCACTGAACTAAAACAAGGGATCCGCGCCGTTCCACTTTACGATCGAAAAGGAGAGAAATACAACTCAGTTAGGCTTCTTATGAAATTTGATTTTATTTAA 1785 0.4062 MGSYRVCVCFRRRFKSGEAVAPQEVREIFNKYAEGGAHMTPEQLRRFLVEVQGEVDDEKDGLDTQKVVEEVLQKRHHITKFARHNLTLEDFHHYLFSTEFNPPIRSKVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDIPIIKALHRGVRVVELDIWPNSTKDDVLVLHGRTLTTPVDLIKCLKSIKEHAFSASPYPVVITLEDHLTSDLQAKAAQMITQTFGDMLFCPNDENLNNIPSPEELKYRIMISTKPPKEYLNSKSVRENSEQLLKSKSKDSDEDEWGKEVTDVVHAQNEDDKGDCDSHQQNDDDDESNDDEYETNHESEYKRLIAIHAGKPKGSLKEALKVEEDKVRRLSLSEQALEKAAESLGTDLIRFTQKNFLRIYPKGTRVTSSNYKPLIGWMHGAQMVAFNMQGYGRNLWLMHGMFRSNGECGYVKKPDFLMNVGPNNEVFNPKDKLEVKKTLKVKIYVGDGWSMDFKQTHFDSYSPPDFYARVGIAGVPADVTMKKTKTIEDNWIPTWEEEFTFPLTVPELALLRVEVHEYDMSETDDFAGQTCLPITELKQGIRAVPLYDRKGEKYNSVRLLMKFDFI* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2398 594 PRINTS Phospholipase C signature 115 133 IPR001192 GO:0035556
Mtr5g2398 594 PRINTS Phospholipase C signature 141 161 IPR001192 GO:0035556
Mtr5g2398 594 PRINTS Phospholipase C signature 238 255 IPR001192 GO:0035556
Mtr5g2398 594 PRINTS Phospholipase C signature 384 405 IPR001192 GO:0035556
Mtr5g2398 594 PRINTS Phospholipase C signature 405 423 IPR001192 GO:0035556
Mtr5g2398 594 PRINTS Phospholipase C signature 560 570 IPR001192 GO:0035556
Mtr5g2398 594 MobiDBLite consensus disorder prediction 260 324 - -
Mtr5g2398 594 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 3 593 - -
Mtr5g2398 594 SMART plcx_3 110 254 IPR000909 -
Mtr5g2398 594 CDD C2_PLC_like 464 593 - -
Mtr5g2398 594 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 359 445 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mtr5g2398 594 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 356 444 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mtr5g2398 594 Gene3D Phosphatidylinositol (PI) phosphodiesterase 106 459 IPR017946 GO:0006629|GO:0008081
Mtr5g2398 594 SUPERFAMILY EF-hand 9 112 IPR011992 -
Mtr5g2398 594 SMART C2_3c 466 574 IPR000008 -
Mtr5g2398 594 SMART plcy_3 329 446 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mtr5g2398 594 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 3 593 IPR001192 GO:0035556
Mtr5g2398 594 Pfam Phosphoinositide-specific phospholipase C, efhand-like 23 99 IPR015359 -
Mtr5g2398 594 SUPERFAMILY PLC-like phosphodiesterases 110 447 IPR017946 GO:0006629|GO:0008081
Mtr5g2398 594 Gene3D C2 domain 461 594 IPR035892 -
Mtr5g2398 594 CDD PI-PLCc_plant 109 433 - -
Mtr5g2398 594 Pfam Phosphatidylinositol-specific phospholipase C, X domain 112 254 IPR000909 -
Mtr5g2398 594 Pfam C2 domain 467 568 IPR000008 -
Mtr5g2398 594 Gene3D - 20 103 - -
Mtr5g2398 594 MobiDBLite consensus disorder prediction 260 308 - -
Mtr5g2398 594 ProSiteProfiles C2 domain profile. 440 576 IPR000008 -
Mtr5g2398 594 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 110 254 - -
Mtr5g2398 594 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 466 593 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2398 Mtr-Chr5 31392374 31397588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2398 1 594 Acyl Lipid Metabolism Gene Families AT5G58700 63.149 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2398 K05857 - tcc:18590491 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2398 5 31392374 31397588 Mtr5g2398 5 31392374 31397588 ECH
Mtr5g2398 5 31392374 31397588 Mtr3g2165 3 35193625 35198368 ECH
Mtr5g2398 5 31392374 31397588 Mtr5g2821 5 36746634 36752163 ECH