Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5054 ATGTCGGTTGCTTTGAGTTCAATTTGCAAAGAGAGGATAAATTGGGAAGGTCAAACAGAACATTGTTCTGTTGATCCAATCCTGATTTACCTAACAGTTGATAGTGTAATTACACCGATGCGTGTTTTGGAGTCTGATTCAATTGCTTCAGTGAAATTGAGGATTCAGCAATGTAAAGGTTTTGTGGTCAAGAAACAGAAGCTTGTTTTCGGTGGCAGAGAGCTTGCGCGTAATGATACACTTATTAAGGAGTATGGTGTCGCCGATGGCAATGTTCTTCATTTGGTTTTACGCCTTTCGGATCTTCTTTTTATTGTTGTTAGGACTGTTTCGGGTAAGGAGTTTGAGTTTCATATTGATAGGCATAGGAATGTGGGGTATCTTAAACAAAGGATTAGGAAAAAGGGGGAAGGTTTTATTGATCTTGAGGAACAAGAGCTTTTCTGTAATGATGAAGAGCTTGATGATCAGATTCTCTTTCATGATATATGTAAAGGTGATGATGATGTAGTTCATTTGATTATTAAGAAATCGGTTAAGGTTAGAACTACAGCTATTCACAATGATTTGAAGCTTTCTCTTGAGGCTTCGATACCGGAGGAGAGAATTGATCAAAGAGCATTACAATTACAAGTAGAAGAGAATAAGAATAGGAGCAAACAGATTCAGATAGCAAATATACCACCTGGTGTCAGTTTCTGGTTGGAACCTATTGTTGTGAATCCCAAGATCAATTTTTTTCCTTTCCATTGGGACATGATCAACTCCACATATGAGGGTTTGAAGACAGGAAATCATCCTATTAGGTCCTCGGAAGGAACAGGAGGGACTTATTTTATGCTAGATTCAACAGGTCAGGAATATGTTTCAGTTTTCAAGCCCTTGGATGAAGAACCAATGGCTGTGAACAACCCAAGAGGCCTACCAAGTTCAACAAACGGCGAAGGTTTAAAAAGAGGAACAAGAGTAGGAGAAGGAGCTTTGAGGGAGGTTGCAGCTTATGTATTAGATCATCCAAGGAGTGGACCGCGTTTTGTGACTGGTGAAGAAATCGGGTTTTCTGGTGTTCCTCCTACTGTTATGGTGCAGTGCTTACACCAAGAATTTCACCACCCAAATGGTTATGCTTGCTCATCAAACCATGTCAAGATCGGATCGTTACAGAAGTTCATGAATAATGATGGTAGTTGTGAGGACATTGGACCTGGGGCGTTTCCGGTGGAGGAGGTGCATAAGATAACTGTGCTTGATATAAGAATGGCCAATGTAGACAGACATGCTGGAAATATTTTGACCAGAAAGAAGGCAGGTGGCCAGATTAAGCTCATTCCCATTGATCATGGCTATTGTCTACCAGATAAATTTGAAGATTGCACATTTGATTGGCTTTACTGGCCGCAAGCACGTCAGCCTTACTCACCCGAGACAGTTGATTATATCAATTCTTTGGATGCTGAAAAAGACATTGAACTTTTGAAACTTTATGGATGGGATATTCCACTTCAGTCTGCGCGGACACTTCGCATTTCGACAATGCTGCTGAAGAAAGGGGTTGAGAGAGGTCTTACTCCCTATGCAATTGGAAGCATCATGTGTCGGGAAAATTTGAACAAGGAGTCTGTAATTGAGGAAATTATAAGAGAAGCACAAGATTCCTTGCTTCATGACATGGAGGAATCATCGTTTCTTGAATCCGTCTCCCGAATCATGGATTCCCATCTTGATAAGCTCACAAAATAA 1740 0.4063 MSVALSSICKERINWEGQTEHCSVDPILIYLTVDSVITPMRVLESDSIASVKLRIQQCKGFVVKKQKLVFGGRELARNDTLIKEYGVADGNVLHLVLRLSDLLFIVVRTVSGKEFEFHIDRHRNVGYLKQRIRKKGEGFIDLEEQELFCNDEELDDQILFHDICKGDDDVVHLIIKKSVKVRTTAIHNDLKLSLEASIPEERIDQRALQLQVEENKNRSKQIQIANIPPGVSFWLEPIVVNPKINFFPFHWDMINSTYEGLKTGNHPIRSSEGTGGTYFMLDSTGQEYVSVFKPLDEEPMAVNNPRGLPSSTNGEGLKRGTRVGEGALREVAAYVLDHPRSGPRFVTGEEIGFSGVPPTVMVQCLHQEFHHPNGYACSSNHVKIGSLQKFMNNDGSCEDIGPGAFPVEEVHKITVLDIRMANVDRHAGNILTRKKAGGQIKLIPIDHGYCLPDKFEDCTFDWLYWPQARQPYSPETVDYINSLDAEKDIELLKLYGWDIPLQSARTLRISTMLLKKGVERGLTPYAIGSIMCRENLNKESVIEEIIREAQDSLLHDMEESSFLESVSRIMDSHLDKLTK* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5054 579 MobiDBLite consensus disorder prediction 300 320 - -
Mal7g5054 579 Gene3D - 104 191 - -
Mal7g5054 579 ProSiteProfiles Ubiquitin domain profile. 103 177 IPR000626 GO:0005515
Mal7g5054 579 SMART ubq_7 27 98 IPR000626 GO:0005515
Mal7g5054 579 SMART ubq_7 103 176 IPR000626 GO:0005515
Mal7g5054 579 Pfam Ubiquitin family 37 99 IPR000626 GO:0005515
Mal7g5054 579 Pfam Ubiquitin family 105 177 IPR000626 GO:0005515
Mal7g5054 579 SUPERFAMILY Ubiquitin-like 99 177 IPR029071 -
Mal7g5054 579 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 579 IPR044571 -
Mal7g5054 579 CDD Ubl_ubiquitin_like 105 174 - -
Mal7g5054 579 Gene3D - 29 100 - -
Mal7g5054 579 ProSiteProfiles Ubiquitin domain profile. 29 98 IPR000626 GO:0005515
Mal7g5054 579 Pfam Phosphatidylinositol 3- and 4-kinase 273 526 IPR000403 -
Mal7g5054 579 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 264 561 IPR000403 -
Mal7g5054 579 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 2 579 - -
Mal7g5054 579 SUPERFAMILY Protein kinase-like (PK-like) 424 578 IPR011009 -
Mal7g5054 579 SUPERFAMILY Ubiquitin-like 37 100 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5054 Mal-Chr7 119695983 119698007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g5054 2 576 Acyl Lipid Metabolism Gene Families AT5G24240 56.131 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5054 - - gmx:100809172 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5054 7 119695983 119698007 Mal7g5054 7 119695983 119698007 ECH
Mal7g5054 7 119695983 119698007 Mal5g1128 5 20050419 20053186 ECH
Mal7g5054 7 119695983 119698007 Mal3g4041 3 119066911 119069116 ECH
Mal6g0279 6 3867020 3869833 Mal7g5054 7 119695983 119698007 PCT