Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4041 ATGTCATCTGCTGGTGTTAGTACTCTTAGTCCAGTGGATCCCACTGAGCCATTGTTGTCTCCAAATGCATTCCATTTACCATCTCACTTGTCTTTTGAGGACAAATCCATTTTCATATTTCTCTCATTTTCGGGTTCGTTGACTCCTATTCGTGTTATGGAATGGGATACTATTGAGTCTGTCAAATTCAAAATCCAAAGGAGTGAGAGTCTTCCATTTTTAATTAACAAACAGAAGTTGGTTTATGCTGGTCGTGAACTTGCTCGAAGTGATACTCTACTCAAGGATTATGGAGTAACCGATGGAAATGTTTTGCATTTGATAATCAAATTATCAGATCTTCAGCTCATCAATGTGAAAACATCTTCTGGGAAGGAATTTTCTTTTCAGGTTGAACGAGGTAGGGATGTCAAGTACATCAAGCGAAGGATTGCTAAAAAGGAGAAACAATTTGATGATCTTGAAGAGCAGGAACTTGTGTGTAATGGGGAACGGTTGGAGGATCAGAAGCTTATTGATGATATATGCTGCAAGCATAATGATGCAGTGGTGCATCTGTTTGTTCGGAAAAGGCATGCAAAAGTTCATAGAAGACCCCTTGAGTTGTCCATTGTAGCAACAGACTTGGCTGATAAGAAAACTGACAATGTTTTCGGAAATTCTTGTGGAAGAAAATTTGAAGTTGGTGGTGAAGAAGATACTGATGTGATTAGAAGAGCGGTGCCAAGAAAGCTTCCCGATAGAGATTTTCTTTTGGAGCCAATTATAGTTAACCATAAAATTGAGTTAGCTCCTGTGATTCAGAATATGGTAAACTCAGCATATGATGGACTAGCTAGTGAAAACTATCCAATAGGATCTGCAGAGGGTACAGGAGGAGCTTACTTTATGCTTGATTCAACTGGTCAGAAGTACGTCTCTGTTTTTAAGCCTATCGATGAAGAGCCAATGGCAGTGAATAACCCCCGAGGTCTTCCATTATCATTAAACGGTGAAGGCTTAAAAAAGGGTACAATAGTTGGTCAAGGAGCGTTCAGGGAAGTTGCTGCTTATGTTTTGGATCATCCAATAAGTGGACGCCGCAAGTTATTTGGTGATGTGAAGGGTTTTGCTGGTGTTCCTCCAACATTGATGGTCAAGTGCTTGCATAAAGGATTTAACCATCCGGGAGACTTGATTGCTAAGATTGGATCCATGCAGATGTTTGTGAAAAATAATGGGAGCTGTGAAGATATCGGTCCTGGGGCTTTCCCGGTAAATGAAGTTCACAAAATTAGTGTACTGGACATAAGATTGGCAAATGCAGATAGGCATGCTGGGAATATTTTGATCAGCACAGAGGAGGACAATGACCAGTCTGTTCTGGTTCCAATTGATCATGGATACTGCTTGCCCACAAGTTTTGAAGATTGTACCTTTGAATGGCTTTACTGGCCCCAATCCCGCCAGCCGTATTCTGCGGAAACTATTGAGTACATAAAGTCACTGGATGCTGAAGAAGATATTTCACTTTTGAAGTTTCATGGATGGGATCTGCCAATTGAATGTGCCCGAACGCTTAGAATCTCAACCATGCTTTTGAAGAAAGGGGTTGAGAGAGGATTGACCCCTTTTGCAATTGGAAACTTGATGTGCAGGGAATCACTGAACAAGGAATCTGTGATAGAGGAAATAGTTGAAGAAGCATTCGATTCTGTTCTTCCTGGCACAAGTGAAGCTACATTGCTGGATGCTGTTTCTCAAATCATGGACCAGCGCCTTGATAAGATTTTCAGCTCTCTTTTTTAA 1788 0.4094 MSSAGVSTLSPVDPTEPLLSPNAFHLPSHLSFEDKSIFIFLSFSGSLTPIRVMEWDTIESVKFKIQRSESLPFLINKQKLVYAGRELARSDTLLKDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKRHAKVHRRPLELSIVATDLADKKTDNVFGNSCGRKFEVGGEEDTDVIRRAVPRKLPDRDFLLEPIIVNHKIELAPVIQNMVNSAYDGLASENYPIGSAEGTGGAYFMLDSTGQKYVSVFKPIDEEPMAVNNPRGLPLSLNGEGLKKGTIVGQGAFREVAAYVLDHPISGRRKLFGDVKGFAGVPPTLMVKCLHKGFNHPGDLIAKIGSMQMFVKNNGSCEDIGPGAFPVNEVHKISVLDIRLANADRHAGNILISTEEDNDQSVLVPIDHGYCLPTSFEDCTFEWLYWPQSRQPYSAETIEYIKSLDAEEDISLLKFHGWDLPIECARTLRISTMLLKKGVERGLTPFAIGNLMCRESLNKESVIEEIVEEAFDSVLPGTSEATLLDAVSQIMDQRLDKIFSSLF* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4041 595 SUPERFAMILY Ubiquitin-like 109 193 IPR029071 -
Mal3g4041 595 ProSiteProfiles Ubiquitin domain profile. 117 174 IPR000626 GO:0005515
Mal3g4041 595 CDD Ubl_ubiquitin_like 117 187 - -
Mal3g4041 595 SUPERFAMILY Ubiquitin-like 34 111 IPR029071 -
Mal3g4041 595 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 281 574 IPR000403 -
Mal3g4041 595 Gene3D - 37 110 - -
Mal3g4041 595 SMART ubq_7 115 189 IPR000626 GO:0005515
Mal3g4041 595 SMART ubq_7 37 110 IPR000626 GO:0005515
Mal3g4041 595 ProSiteProfiles Ubiquitin domain profile. 56 110 IPR000626 GO:0005515
Mal3g4041 595 Pfam Ubiquitin family 117 191 IPR000626 GO:0005515
Mal3g4041 595 Pfam Ubiquitin family 39 111 IPR000626 GO:0005515
Mal3g4041 595 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 593 IPR044571 -
Mal3g4041 595 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 593 - -
Mal3g4041 595 SUPERFAMILY Protein kinase-like (PK-like) 399 592 IPR011009 -
Mal3g4041 595 Coils Coil 137 157 - -
Mal3g4041 595 Pfam Phosphatidylinositol 3- and 4-kinase 290 539 IPR000403 -
Mal3g4041 595 Gene3D - 116 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4041 Mal-Chr3 119066911 119069116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4041 34 589 Acyl Lipid Metabolism Gene Families AT5G24240 55.258 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4041 - - gmx:100791631 995.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4041 3 119066911 119069116 Mal3g4041 3 119066911 119069116 ECH
Mal5g1128 5 20050419 20053186 Mal3g4041 3 119066911 119069116 ECH
Mal6g0279 6 3867020 3869833 Mal3g4041 3 119066911 119069116 ECH
Mal7g5054 7 119695983 119698007 Mal3g4041 3 119066911 119069116 ECH
Mal3g4041 3 119066911 119069116 Mal2g1794 2 21534497 21537034 PCT