Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0279 ATGTCGGTTGCTGATGTTGCATTGAGACCGATTTTAAAAGAATCGGATAATTCTTCACAATCACATTGTCACCGGACAGATCGAATTCGTCGTTGCTCAAGAGAATCCATTCTAATATACATAACCGTTGACGGAGCAGTCACACCAATGCGTGTATTAGAATCCGATTCAATTGCATCAGTGAAAATGAGGATTCAAGCACACAAAAATGTTTCATGGAAAAAGCAAAACCTAGTTTCAAATGGAAGAGAATTATCTCGAAACAATGCAGTGATCAAAGAGTACGGTGTAACTGCTGGTAATGTTGTTCATTTGGTTCTTCGTCTATCTGACATGATTTTCATTGTTGTGAGGACAATGTGTGGTAAGGAATTTGAGTTTCAGATTGATCGGCATAGGAATGTTGCACATCTTAGAAATTGTATTAAAAGAAAGGGGGGAGGTTTTATTGATCTTGTTGAGGAGGAACAAGAGTTTTTTTGCAGCGGCGAAAAACTTGATGAGAAGAGAATTTTTGATGATATCATTAAGAATGATGATGATGTTATTCATCTCATTGTTAAAAAATCGGCGAAAGTTAACGCTACTTTTGTTCATAATAAGGATTTAGAGCTTTCTGTTGTTGCTGAAAATCAGAATTTGAATAATCAGAATCAGAATGAGGTTGTTAAGGTTATAGAACAACCCTGTGGTTTTGATTTTTTGTTAGAGCCAATTTTTGTGAACCCTAGGATCAATTTTTTCCCTTTCCTATGGGATATGATAGATGCAACTTTCAATGGTTTGAGAAAAGGAAATAAACCTGTGAGATCTTCTGAGGGAACAGGTGGGACTTACTTCATGCAAGATTTGAAATGTGTTGAATATGTTTCTGTTTTCAAGCCAATTGATGAGGAACCCATGGCGGTTAATAATCCGCGTGGATTGCCAGTTTCGTTGAACGGTGAGGGTTTGAAGAGAGGGACAAAGGTTGGAGAAGGAGCTGTCAGAGAAGTTGCGGCTTATATATTGGATCATCCGAAGGCTGGGCCGCGTTTGGTGTCTGGTGAAGCAGTTGGTTTTACTGGTGTTCCGCCTACGGTTATGGTTCGGTGTTTACACGAAGCGTTTAATTACCCTGATGGTGGTGATTGTGGCTCTTTGACGATGGATCACAAGGTGGGATCTTTGCAGAAGTTTATGAGTAATGATGGTAATTGTGAGGATATTGGACCTGGAGTTTTTCCTGTGCAAGAGGTGCATAAGATCAGTGTGCTTGATATAAGAATGGCTAATGCAGATAGGCATGCTGGGAACATATTGTTTAGAAAAGAGTCGAATGGTGAGATTTTGCTCATTCCCATTGATCATGGATATTGTCTACCTGAGAAATTTGAAGATTGCACATTTGATTGGCTTTACTGGCCTCAAGCACGTCAACCATACTCTCCCGATACAGTTGATTACATAAAATCTCTGGATGCTGAAAAGGACATAGAGCTTCTGAAATATTATGGTTGGGATGTTCCAGTTGAGTGTGCTAGAACCCTCCGCATCTCCACAATGTTACTGAAGAAAGGGGTTGAGAGAGGTCTCACTCCATATGCCATTGGAAGCATCATGTGTAGGGAAAATATAAACAAGAAATCAGTAATTGAGGAGATTGTCTGTGAAGCCCAGGAATCATTGCTACCAGGCACAGAGGAATCTGATTTTCTCGAATTTGTATCGCAGATCATGGATTCCCGCCTTGGTGAGCTTTTGAAATAG 1749 0.3985 MSVADVALRPILKESDNSSQSHCHRTDRIRRCSRESILIYITVDGAVTPMRVLESDSIASVKMRIQAHKNVSWKKQNLVSNGRELSRNNAVIKEYGVTAGNVVHLVLRLSDMIFIVVRTMCGKEFEFQIDRHRNVAHLRNCIKRKGGGFIDLVEEEQEFFCSGEKLDEKRIFDDIIKNDDDVIHLIVKKSAKVNATFVHNKDLELSVVAENQNLNNQNQNEVVKVIEQPCGFDFLLEPIFVNPRINFFPFLWDMIDATFNGLRKGNKPVRSSEGTGGTYFMQDLKCVEYVSVFKPIDEEPMAVNNPRGLPVSLNGEGLKRGTKVGEGAVREVAAYILDHPKAGPRLVSGEAVGFTGVPPTVMVRCLHEAFNYPDGGDCGSLTMDHKVGSLQKFMSNDGNCEDIGPGVFPVQEVHKISVLDIRMANADRHAGNILFRKESNGEILLIPIDHGYCLPEKFEDCTFDWLYWPQARQPYSPDTVDYIKSLDAEKDIELLKYYGWDVPVECARTLRISTMLLKKGVERGLTPYAIGSIMCRENINKKSVIEEIVCEAQESLLPGTEESDFLEFVSQIMDSRLGELLK* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0279 582 SUPERFAMILY Protein kinase-like (PK-like) 418 579 IPR011009 -
Mal6g0279 582 CDD Ubl_ubiquitin_like 115 186 - -
Mal6g0279 582 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 581 - -
Mal6g0279 582 Gene3D - 11 111 - -
Mal6g0279 582 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 265 564 IPR000403 -
Mal6g0279 582 Coils Coil 200 220 - -
Mal6g0279 582 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 581 IPR044571 -
Mal6g0279 582 SMART ubq_7 37 108 IPR000626 GO:0005515
Mal6g0279 582 SMART ubq_7 113 188 IPR000626 GO:0005515
Mal6g0279 582 ProSiteProfiles Ubiquitin domain profile. 39 112 IPR000626 GO:0005515
Mal6g0279 582 Gene3D - 112 213 - -
Mal6g0279 582 SUPERFAMILY Ubiquitin-like 41 110 IPR029071 -
Mal6g0279 582 ProSiteProfiles Ubiquitin domain profile. 113 192 IPR000626 GO:0005515
Mal6g0279 582 Pfam Ubiquitin family 41 109 IPR000626 GO:0005515
Mal6g0279 582 Pfam Phosphatidylinositol 3- and 4-kinase 274 529 IPR000403 -
Mal6g0279 582 SUPERFAMILY Ubiquitin-like 109 189 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0279 Mal-Chr6 3867020 3869833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0279 1 579 Acyl Lipid Metabolism Gene Families AT5G24240 53.012 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0279 - - gmx:100787492 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0279 6 3867020 3869833 Mal6g0279 6 3867020 3869833 ECH
Mal6g0279 6 3867020 3869833 Mal5g1128 5 20050419 20053186 ECH
Mal6g0279 6 3867020 3869833 Mal3g4041 3 119066911 119069116 ECH
Mal6g0279 6 3867020 3869833 Mal7g5054 7 119695983 119698007 PCT