Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1128 ATGTCTTCTGCTGGTGTAACTACCCTTAGTCCTGTTTCAAGAGAGACATTGTTGTCTCCAACAAATGGATTTTGTAATCCACTGCACTTGTCTTCGAATCATCATGAGTTTATTTTTGTGTATCTTTCGTATTCGGGGTCTTTGTCTCCTATGCGTGTGTTACCGTCCGATACAATTGAGTCGGTGAAACTCAAAATTCAAAGGAATGAAGGGGTGACAAACAAACAGAAGTTGGTTTGTAATGGTCGCGAGTTATCGCGTAGCAATTCTTTGCTCAAGGATTACGGAGTTACAGAAGGGAATGTATTGCATTTGGTGATTCGTCTGGCAGATCTACAGACCATCAGTGTGAGAACTTGTTCGGGGAAGGAGTTTACCTTTCAGGTCGAAAGGTGTAAGGATGTTTGGTATGTTAAGAAACAGATTGCGGAAAAGGAAAGAGAGTTTGCCGATCCTGAAGAGCAGGAAGTTGTGTGTAATGGGGAACTGCTTGATGACCAGAAGCTAATAGATGATATTTGTAGCAAATATAATGATGCGGTGATACATCTTTTTGTTAGAACGAAGTATGCGGATGTTAGTACAGGACTCGATGAGTTATCCATTGCAGCAAAAGAATTGAATGATACGAAGAATTGTGATGCTAATGAAGGTGATTACGGAAGGAAATATGATAGCAAAGAAGATGCGAGAAAGGAGTATGAAGCCATCGAACGAATTCTGTCGAGAAAAACTCTTGATAGAGGTCTTCTTTTGGAGCCGGTTACTGTTAACCCTAAAGTTGAACTAGCTTCAGAGGTTTGGGATATGATAAACACTACATATGATGGGCTAGATAGTGGAAATTCTCCAATCAGATCTGCAGAGGGCACAGGTGGGGCTTACTTTATGCTAGACTCAACAGGGCAAAAGTATGTATCGGTTTTTAAGCCTATTGATGAAGAACCAATGGCTGTGAATAACCCTAGAGGTTTACCTTTGTCATTAGACGGTGAAGGCTTGAAAAAGGGTACAAGAGTTGGCCAAGGAGCTTTCAGGGAAGTTGCTGCTTATATTTTGGATCATCCAATATGTGGCCGCCGATCATTATTTGGCGATGAGAATGGATTTGCTGGTGTTCCTCCGACTGTTATGGCGAAGTGCTTGCACAAAGCATTTAACCATCCAGAGGGTTTGACTGCTAAGTTTGGTTCCTTGCAAATGTTCGTGGAGAATAATGGAAGTTGTGAGGATATGGGACCTGGCGCTTTTCCGGTGAAAGAAGTGCATAAAATTACTGTGCTGGACATGAGACTTGCAAATGCAGATAGGCATGCTGGGAATATTTTGCTTGGCAAAGAGAAGAAAAATGACCAGGCTGTTTTGATTCCAATTGATCATGGATACTGCCTCCCCACTAGTTTTGAAGATTGTACCTTTGAATGGCTTTATTGGCCTCAAGCTCGCCAGCCTTACTCTCCAGAGATCATCGACTACATTAAGTCCCTTGACGCTGAAGAAGACATTGCCCTTCTGAAGTTTCATGGATGGGATCTGCCACTTGAATGCGCCCGCACTCTCCGAATCTCGACCATGCTTCTGAAAAAAGGAGTGGAGAAAGGGATGACCCCTTTTGCCATTGGAAGCCTAATGTGCCGAGAATCGTTGAACAAGGAGTCTGTGATTGAGGGGATTGTTAAAGCAGCACTTGATTCTGTTCTTCCTGGTACCAGTGAAGCTACTTTTATGGATGCTGTTTCTGACATTATTGATCAACACCTTGAAGAGATCACCAGCAATTATAATTCTTAA 1791 0.4243 MSSAGVTTLSPVSRETLLSPTNGFCNPLHLSSNHHEFIFVYLSYSGSLSPMRVLPSDTIESVKLKIQRNEGVTNKQKLVCNGRELSRSNSLLKDYGVTEGNVLHLVIRLADLQTISVRTCSGKEFTFQVERCKDVWYVKKQIAEKEREFADPEEQEVVCNGELLDDQKLIDDICSKYNDAVIHLFVRTKYADVSTGLDELSIAAKELNDTKNCDANEGDYGRKYDSKEDARKEYEAIERILSRKTLDRGLLLEPVTVNPKVELASEVWDMINTTYDGLDSGNSPIRSAEGTGGAYFMLDSTGQKYVSVFKPIDEEPMAVNNPRGLPLSLDGEGLKKGTRVGQGAFREVAAYILDHPICGRRSLFGDENGFAGVPPTVMAKCLHKAFNHPEGLTAKFGSLQMFVENNGSCEDMGPGAFPVKEVHKITVLDMRLANADRHAGNILLGKEKKNDQAVLIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSPEIIDYIKSLDAEEDIALLKFHGWDLPLECARTLRISTMLLKKGVEKGMTPFAIGSLMCRESLNKESVIEGIVKAALDSVLPGTSEATFMDAVSDIIDQHLEEITSNYNS* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1128 596 ProSiteProfiles Ubiquitin domain profile. 38 108 IPR000626 GO:0005515
Mal5g1128 596 Pfam Phosphatidylinositol 3- and 4-kinase 290 539 IPR000403 -
Mal5g1128 596 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 594 IPR044571 -
Mal5g1128 596 Coils Coil 227 247 - -
Mal5g1128 596 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 281 574 IPR000403 -
Mal5g1128 596 SUPERFAMILY Ubiquitin-like 110 188 IPR029071 -
Mal5g1128 596 SUPERFAMILY Protein kinase-like (PK-like) 428 593 IPR011009 -
Mal5g1128 596 SUPERFAMILY Ubiquitin-like 29 110 IPR029071 -
Mal5g1128 596 Gene3D - 113 195 - -
Mal5g1128 596 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 594 - -
Mal5g1128 596 ProSiteProfiles Ubiquitin domain profile. 113 172 IPR000626 GO:0005515
Mal5g1128 596 Pfam Ubiquitin family 115 188 IPR000626 GO:0005515
Mal5g1128 596 Pfam Ubiquitin family 44 109 IPR000626 GO:0005515
Mal5g1128 596 Gene3D - 36 112 - -
Mal5g1128 596 PRINTS Ubiquitin signature 47 67 IPR019956 -
Mal5g1128 596 PRINTS Ubiquitin signature 89 110 IPR019956 -
Mal5g1128 596 CDD Ubl_ubiquitin_like 115 185 - -
Mal5g1128 596 SMART ubq_7 113 187 IPR000626 GO:0005515
Mal5g1128 596 SMART ubq_7 38 108 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1128 Mal-Chr5 20050419 20053186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1128 1 593 Acyl Lipid Metabolism Gene Families AT5G24240 54.153 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1128 - - gmx:100815111 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1128 5 20050419 20053186 Mal5g1128 5 20050419 20053186 ECH
Mal5g1128 5 20050419 20053186 Mal3g4041 3 119066911 119069116 ECH
Mal6g0279 6 3867020 3869833 Mal5g1128 5 20050419 20053186 ECH
Mal7g5054 7 119695983 119698007 Mal5g1128 5 20050419 20053186 ECH