Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1016 ATGACTTCTCCTCAATTTGCTACCACTTTGGTAACCCTAATTCTCTTCCAACTCCTTATAGGTTCATATTCAACAACATTCACAATTGTGAACCAGTGCAGTTACACAGTTTGGCCGGGAATTTTATCCGGCGCCGGAACAGCACCGTTCTCCACCACCGGTTTCGCCCTTCAACCCGGCGAGTCCAATGCCCTCGCCGTACCACCTTCCTGGTCCGGCCGTCTATGGGGACGAACACACTGCTCACAAGACCCTACCGGAAAATTCTCATGCATCACCGGCGACTGCGATTCCTCCACCATCGAATGCGCCGGAAGAAACGCTATACCACCGGCAACATTAGCAGAATTCACCCTCAACGGCGCCGGAGGACTTGATTTCTTCGACGTAAGCCTCGTCGACGGTTACAATCTCCCGATATTGATCGAACCACACGGTGAAACCGGTGGCGGGAATTGCACGGCGACTGGTTGCTCCGTCGACTTGAACGCGGCGTGTCCAACAGAGTTGAAAGTATTGAGCAGTAACGGCGGCGGTGAAGAGAGCGTGGCGTGTAAAAGCGCGTGTGAAGCGTTTGGGGATCCGCAATATTGTTGTAATGGTGCTTATGGTACGCCTGATACATGTAAACCAAGTTCCTACTCGCAGTTTTTTAAGAGTGCGTGTCCACGCGCTTATAGTTATGCTTATGATGATGGAACTAGCACTTTCACTTGTGCTTCTGCTGATTATACCATCACTTTTTGTCCCACACCCTCCACAAGTTCGATCAAATCTGGGAATGGAAAATATCCACTGCCGGTGACGGATGTGTCTGGTGTTCGACATGTGGATCGGACGGTCAACAACGTTGTAACTGTTGTTATTGCCTCTGTTTTGATGGTTTTGGTGGTTGACCGGTTGTGGTAA 909 0.5028 MTSPQFATTLVTLILFQLLIGSYSTTFTIVNQCSYTVWPGILSGAGTAPFSTTGFALQPGESNALAVPPSWSGRLWGRTHCSQDPTGKFSCITGDCDSSTIECAGRNAIPPATLAEFTLNGAGGLDFFDVSLVDGYNLPILIEPHGETGGGNCTATGCSVDLNAACPTELKVLSSNGGGEESVACKSACEAFGDPQYCCNGAYGTPDTCKPSSYSQFFKSACPRAYSYAYDDGTSTFTCASADYTITFCPTPSTSSIKSGNGKYPLPVTDVSGVRHVDRTVNNVVTVVIASVLMVLVVDRLW* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1016 302 Gene3D Thaumatin 25 250 IPR037176 -
Mal6g1016 302 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 9 269 - -
Mal6g1016 302 ProSiteProfiles Thaumatin family profile. 24 250 IPR001938 -
Mal6g1016 302 SUPERFAMILY Osmotin, thaumatin-like protein 25 250 IPR037176 -
Mal6g1016 302 CDD TLP-PA 26 249 - -
Mal6g1016 302 SMART tha2 27 250 IPR001938 -
Mal6g1016 302 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Mal6g1016 302 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Mal6g1016 302 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Mal6g1016 302 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Mal6g1016 302 Pfam Thaumatin family 31 250 IPR001938 -
Mal6g1016 302 PANTHER OS03G0233200 PROTEIN 9 269 IPR001938 -
Mal6g1016 302 PIRSF PR5 1 294 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1016 Mal-Chr6 15184506 15186286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1016 6 255 Receptor kinase-like Gene Family AT5G38280 50.397 1.05e-84 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1016 - - gmx:100807106 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1016 6 15184506 15186286 Mal5g3329 5 96761525 96763244 ECH
Mal2g0475 2 5440489 5443035 Mal6g1016 6 15184506 15186286 ECH
Mal6g1016 6 15184506 15186286 Mal6g1016 6 15184506 15186286 ECH
Mal6g1016 6 15184506 15186286 Mal5g3327 5 96736910 96738286 PCT