Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0475 ATGGATCAACTAAGTACTAAATTATTTTCAATATTCCTTATTACACTTTATCTTTCAACATCAGGGGTAATATCAACAACATTCACACTCGTTAACAAATGCAACTACACAGTGTGGCCGGGAATTCTTTACAACGCCGGAGTTGCGCCGCTTTCAACCACCGGTTTCGTTCTTCAATCCGGCGACTCCAAATCAATCACCCCACCCGCTTCATGGGGAGGCCGTTTCTGGGGACGCACACACTGTTCCCAAGACTCCACCGGAAAATTCTCCTGCCTCACCGGCGATTGTAACTCCGGCAAACTCGAATGCTCCGGCGCCGGAGCAACACCACCAGCTACCTTAGCGGAATTCACTCTGGACGGATCCGGTGGACTCGATTTCTTCGACGTGAGTTTAGTCGACGGTTACAACGTGCCTATGCTTGTAGTTCCACACGGTGGCTCCGGTGATAACTGTACGAGTACTGGTTGTATTGGGGATTTACTCGGCGCGTGTCCTTCAGAGCTTAAGGTTACGAGCGTGGATGGGAAAGAGAGCGTGGCGTGTAAAAGTGCTTGTGAGGCGTTTGGGTCGGCGCAATATTGTTGCAGCGGCGCGTATGGTTCACCTAACACTTGCAAGCCTTCGAGTTATTCTGAGTTGTTTAAGAGTGCTTGCCCACGCGCGTATAGCTACGCGTATGATGATAAGACAAGCACGTTTACATGCGCTTCTGCGGATGAATACACAATCACTTTTTGCCCCTCCACTAACATCCCCAGTCAAAAATCGTGGCAGGGACAAAATCCAAAATCAGATGGCAGTGACTCATCATCGCCTCAGCTTAACAACGGCTCAATGGTGTACGTTGGTGCCTTTGACCAGAGTGAAATATCATGGGCCACGTGTACCAATTTGTTGGAATCCCAAACCATTATCACCATCACAACGGCTATGTGGCTCTTGTGTCAGCTTTTCCACTTCTAA 969 0.4892 MDQLSTKLFSIFLITLYLSTSGVISTTFTLVNKCNYTVWPGILYNAGVAPLSTTGFVLQSGDSKSITPPASWGGRFWGRTHCSQDSTGKFSCLTGDCNSGKLECSGAGATPPATLAEFTLDGSGGLDFFDVSLVDGYNVPMLVVPHGGSGDNCTSTGCIGDLLGACPSELKVTSVDGKESVACKSACEAFGSAQYCCSGAYGSPNTCKPSSYSELFKSACPRAYSYAYDDKTSTFTCASADEYTITFCPSTNIPSQKSWQGQNPKSDGSDSSSPQLNNGSMVYVGAFDQSEISWATCTNLLESQTIITITTAMWLLCQLFHF* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0475 322 SMART tha2 28 249 IPR001938 -
Mal2g0475 322 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Mal2g0475 322 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Mal2g0475 322 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Mal2g0475 322 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Mal2g0475 322 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Mal2g0475 322 ProSiteProfiles Thaumatin family profile. 25 249 IPR001938 -
Mal2g0475 322 PANTHER BNAA02G17480D PROTEIN 9 274 - -
Mal2g0475 322 MobiDBLite consensus disorder prediction 255 275 - -
Mal2g0475 322 CDD TLP-PA 27 248 - -
Mal2g0475 322 Pfam Thaumatin family 32 249 IPR001938 -
Mal2g0475 322 Gene3D Thaumatin 26 249 IPR037176 -
Mal2g0475 322 PANTHER OS03G0233200 PROTEIN 9 274 IPR001938 -
Mal2g0475 322 SUPERFAMILY Osmotin, thaumatin-like protein 26 250 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0475 Mal-Chr2 5440489 5443035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0475 11 266 Receptor kinase-like Gene Family AT5G38280 51.527 2.35e-89 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0475 - - gmx:100780102 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0475 2 5440489 5443035 Mal6g1016 6 15184506 15186286 ECH
Mal2g0475 2 5440489 5443035 Mal5g3329 5 96761525 96763244 ECH
Mal2g0475 2 5440489 5443035 Mal2g0475 2 5440489 5443035 ECH