Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3329 ATGGCAGCTTCAACTCAATTTTCTAGCACTTTGTTCTTTCTATTTCTCATTCATTCCTTACGAGGTTCGAATTCAGCCACATTTACAATTGTAAACAAGTGCAGCTACCCCGTTTGGCCGGGAATTTTGTCCGGTGCCGGAACGGAACAGCCAGCCACGACGGGTTTTGCCCTACAATCGGGCGAATCCAATGCAATCACCATGCCTACTTCTTGGTCCGGCCGCATATGGGGCCGAACATTATGCTCCACCGACTCCACCGGTAAATTCTCATGCATCACCGGAGACTGCGGCTCCTCCAAAGTAGAATGCACCGGCAGCGGCGCCATTCCTCCAGCGACACTCGCGGAGTTCACATTAAATGGTGCTGATGGACTAGATTTCTACGATGTCAGCCTAGTTGACGGTTACAACCTTCCCATAACCGTGGAACCACATGGCGGCGGTGGAAACTGCACAACCACAGGTTGTTTGGTGGACTTGAACGGCGCGTGTCCGACAGAGCTAAAGGTGAAAATTGCGGCGGAAGGTGAAGAGACTAGTGAGAAGAGCGTGGCGTGTAAAAGCGCGTGTGAAGCTTTTGGTGATCCATTGTATTGTTGCAGTGGCGCTTATGCAACTCCACAAACTTGCAAGCCAAGTTCATACTCGCAGTTCTTCAAAAGCGCGTGTCCACGCGCTTATAGCTATGCTTATGATGATGGAACTAGTACCTTCACTTGTTCCTCCGCTGATTACCTCATTACTTTCTGTTCTACACATTCCAAAGGTTCGATCAAGTCAGGGAATGGAAAATTCCCATTTGGAGTGGACATTTGGGCAGGACATGCTCATGGCAATGGTGGTGAGTCAACCAAGGGGATGTCACTAGTTGTGGGAGCTGTTCTAATGAGCATTTGGTGGCAACTCAGTTCTACAATTATTGATTTCATCTCGATCTCAAATCAATGA 951 0.4869 MAASTQFSSTLFFLFLIHSLRGSNSATFTIVNKCSYPVWPGILSGAGTEQPATTGFALQSGESNAITMPTSWSGRIWGRTLCSTDSTGKFSCITGDCGSSKVECTGSGAIPPATLAEFTLNGADGLDFYDVSLVDGYNLPITVEPHGGGGNCTTTGCLVDLNGACPTELKVKIAAEGEETSEKSVACKSACEAFGDPLYCCSGAYATPQTCKPSSYSQFFKSACPRAYSYAYDDGTSTFTCSSADYLITFCSTHSKGSIKSGNGKFPFGVDIWAGHAHGNGGESTKGMSLVVGAVLMSIWWQLSSTIIDFISISNQ* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3329 316 Pfam Thaumatin family 32 251 IPR001938 -
Mal5g3329 316 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Mal5g3329 316 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Mal5g3329 316 PRINTS Pathogenesis-related protein signature 242 251 IPR001938 -
Mal5g3329 316 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Mal5g3329 316 SMART tha2 28 252 IPR001938 -
Mal5g3329 316 CDD TLP-PA 27 251 - -
Mal5g3329 316 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 6 269 - -
Mal5g3329 316 PANTHER OS03G0233200 PROTEIN 6 269 IPR001938 -
Mal5g3329 316 Gene3D Thaumatin 26 251 IPR037176 -
Mal5g3329 316 ProSiteProfiles Thaumatin family profile. 25 254 IPR001938 -
Mal5g3329 316 SUPERFAMILY Osmotin, thaumatin-like protein 26 251 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3329 Mal-Chr5 96761525 96763244 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3329 7 251 Receptor kinase-like Gene Family AT5G38280 54.217 3.73e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3329 - - gmx:100809419 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1016 6 15184506 15186286 Mal5g3329 5 96761525 96763244 ECH
Mal2g0475 2 5440489 5443035 Mal5g3329 5 96761525 96763244 ECH
Mal5g3329 5 96761525 96763244 Mal5g3329 5 96761525 96763244 ECH