Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0104 ATGGAAGCAAACGCAAAGCATTATGTTTTGGTTCACGGAGTTTGCCATGGAGCTTGGTGCTGGTACAAGCTCAAGCCACAGCTTCAGTCTTCTGGCAACAAGGTCACTGTACTAGACCTTGCAGCTTCAGGCATCAACCCAAAAAGAATAGAAGATGTTGGTAGTTTTACTGAGTATTCTGAGCCTCTCTTGAAGTTTTTAGAATCCTTGCCCTCAAGTGAAAAGGTTGTTCTTGTTGGACATAGTTTTGGAGGCTTGAGTTTAGCTCTCGCCATGGACAAGTTCCCTCAGAAGATAGAACTTGCTGTGTTCTTAGCAGCTTTTGTTCCTGATACACAACACCCACCTTCTTATGTCATAGAAAAACAGCCAAAGGAGAGAGCTGAACTGAATGAAGAGTTCAACATGGAGATTTCATCATCTGGATCTGCATCAATGATTTTTAGTTCCCAGTGTTTGTCCACCAAAATTTATCAGCTCTGTCCCATTGAGGATGTTGAGTTAGCGAAGACGTTGATAAGGCCAGGAAATCTTTTCGTTGAAGAATTACAGAAGGCAGAGAAATTCTCAGAAAAAGGGTATGGTTCTGTGGCAAAGGGTTATATTGTGTGTAAGGAGGATGAAATAATTCCATTGGCATATCAAAGGCGGATGATTGAAAATGCTGCAATTGAGCTTGTCCTCGAAATCCAAGACTCTGATCATATGGCTATGCTTTCCCAACCTCAACAACTTTGCCAGTGTCTCCTTCAGATAGGAGTGGAACTAAACAAGGAACTTGATGAAGGATTTAAAAGTGAGGTTTGGGGCGTAGCACTTGACGAAGGAGATACTGGAGCAGTAGTTGTTGGGATCATTAACAAAGATGGCAAAGAAGATGGAACTGATGAAGAAGGCATGCTAAAAACAGAAAGCCCACTTCCTGAAGAATTTGTAGTTCGTGGAGAACTGTGTGGGGCAGTTGATGGCCCTACTGTTCCAGAACTAGAAAATAACCCAGCAAGTTTTGTTGATGGTTGTGAATCTTCTGGTAAATGCAATGTTGGACGTACTCTTTTTGAGGCAACTTCTTTTCTTGATGCTTTGCACTGGTCAGCCACTTGA 1104 0.423 MEANAKHYVLVHGVCHGAWCWYKLKPQLQSSGNKVTVLDLAASGINPKRIEDVGSFTEYSEPLLKFLESLPSSEKVVLVGHSFGGLSLALAMDKFPQKIELAVFLAAFVPDTQHPPSYVIEKQPKERAELNEEFNMEISSSGSASMIFSSQCLSTKIYQLCPIEDVELAKTLIRPGNLFVEELQKAEKFSEKGYGSVAKGYIVCKEDEIIPLAYQRRMIENAAIELVLEIQDSDHMAMLSQPQQLCQCLLQIGVELNKELDEGFKSEVWGVALDEGDTGAVVVGIINKDGKEDGTDEEGMLKTESPLPEEFVVRGELCGAVDGPTVPELENNPASFVDGCESSGKCNVGRTLFEATSFLDALHWSAT 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0104 367 PANTHER METHYLESTERASE FAMILY MEMBER 5 252 IPR045889 -
Lele53g0104 367 Gene3D alpha/beta hydrolase 4 253 IPR029058 -
Lele53g0104 367 SUPERFAMILY alpha/beta-Hydrolases 9 251 IPR029058 -
Lele53g0104 367 FunFam (S)-hydroxynitrile lyase 3 257 - -
Lele53g0104 367 Pfam Alpha/beta hydrolase family 9 245 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0104 Lele-ChrLele53 758964 762572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0104 7 164 Miscellaneous Gene Families AT5G10300 49.375 3.39e-49 162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0236 49 1384216 1384618 Lele53g0104 53 758964 762572 CCT
Lele53g0104 53 758964 762572 Lele55g1387 55 20268553 20269591 hybridization
Lele53g0104 53 758964 762572 Lele56g1328 56 16549044 16550054 hybridization