Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1387 ATGGAAGCAAACGCAAAGCATTATGTTTTGGTTCACGGACTTTGCCATGGGGCTTGGTGCTGGTACAAGCTCAAGCCACAGCTTCAGTCTTCTGGCAACAAGGTCACTGTACTAGACCTTGCAGCTTCAGGCATCAACCGAAAAAGAATAGAAGATGTTGGTAGTTTTACTGAGTATTCTGAGCCTCTCTTGGAGTTTTTAGAATCATTGCCTTCAAGTGAAAAGGTTGTTCTTGTTGGACATAGTTTTGGAGGCTTGAGTTTAGCTCTCGCCATGGACAAGTTCCCTCAGAAGATAGAACTTGCTGTGTTCTTAGCAGCTTTTGTTCCTGATACCCAACACCCACCCTCTTATGTCATAGAAAAACAGGAGAGAGCTGAATCGAATGAAGATTTCAACATGGAGATTTCATCATCTGGATCTGCATCAATGATTTTTAGTTCCAAGTGTTTGTCCACCAAAATTTATCAGCTCTGTCCCATTGAGGATGTTGAGTTAGCGAAGACGTTGATAAGGCCAGGAAATCTTTTCGTTGAAGAATTACAGAAGGCAGAGAAATTCTCAGAAGAAGGGTATGGTTCTGTGGCAAAGGGTTATATTGTGTGTAAGGAGGATGCGATAATTCCATTGGCATATCAAAGGCGGATGATTGAAAACGCTGCGATTGAGCTTGTCCTCGAGATCGAAGACTCTGATCATATGGCTATGCTTTCCCAACCTCAACAACTTTGCCAGTGTCTCCTTCAGATAGTTGACAAAAACATATGA 768 0.4245 MEANAKHYVLVHGLCHGAWCWYKLKPQLQSSGNKVTVLDLAASGINRKRIEDVGSFTEYSEPLLEFLESLPSSEKVVLVGHSFGGLSLALAMDKFPQKIELAVFLAAFVPDTQHPPSYVIEKQERAESNEDFNMEISSSGSASMIFSSKCLSTKIYQLCPIEDVELAKTLIRPGNLFVEELQKAEKFSEEGYGSVAKGYIVCKEDAIIPLAYQRRMIENAAIELVLEIEDSDHMAMLSQPQQLCQCLLQIVDKNI 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1387 255 Pfam Alpha/beta hydrolase family 9 243 IPR000073 -
Lele55g1387 255 PANTHER METHYLESTERASE FAMILY MEMBER 5 250 IPR045889 -
Lele55g1387 255 SUPERFAMILY alpha/beta-Hydrolases 9 253 IPR029058 -
Lele55g1387 255 FunFam (S)-hydroxynitrile lyase 3 255 - -
Lele55g1387 255 Gene3D alpha/beta hydrolase 1 254 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1387 Lele-ChrLele55 20268553 20269591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1387 7 162 Miscellaneous Gene Families AT5G10300 48.750 2.56e-49 159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0236 49 1384216 1384618 Lele55g1387 55 20268553 20269591 CCT
Lele53g0104 53 758964 762572 Lele55g1387 55 20268553 20269591 hybridization