Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1328 ATGGACGTTAAAATGAGTGGTGAAGAAAATAAGAAAAAAAGGCACTATGTTCTGGTGCATGGAGCTTGCCATGGAGCTTGGTGCTGGTTTAAGCTCAAGCCACAGCTTCAGTCTGCAGGCAACAAGGTCACAGTACTCGACCTTGCAGCTTCAGGCATCAATCCTAAGAGAATGGAAGATGTTCGCAGTTTTGCTGAGTATTCTGAGCCTCTCTTAGAGCTGTTAGAATCACTGCCTCCAAGTGAAAAAGTAGTTCTTGTTGGTCACAGCTTTGGAGGGTTTAGTTTAGCTCTCGCCATGGACAAGTTCCCTCTCAAGATCGCGCTTGCTGTTTTCTTAGCAGCTTTCGTTCCTGATACCCGACACCCACCTTCATTTGTCTTGGACCAGCACGTCGAAAGAAACCATACTGAATGGTTAGACAATGAGTTATCGCCCAGTGGAAGCATAACATTCGGATCCAAATTCTTATACGAGAAGCTCTATCAACTATGCTCCTCTGAGGATCTTCAATTGGCCAAGACTCTGGTAAGGCCAGGTTGGCTTTTTCTTGAAGAATTGAGGAAGGCCGAGAATTTCAGCAAAGAGGGATATGGGTCGGTTCCGGTTGCTTATATTGTGTGTCATGAGGACTTGGCGATTCCAATGGAGTTTCAGAGATGGATGATCCAAAATGCTTGTGTTGATGAGGTTATGGAAATCATGGATGCCGATCATATGGCCATGCTTTCCAAGCCACATCAACTTTTCTCGGCTCTCCTCCACATTGCTAACAAGTATACCTGA 786 0.4529 MDVKMSGEENKKKRHYVLVHGACHGAWCWFKLKPQLQSAGNKVTVLDLAASGINPKRMEDVRSFAEYSEPLLELLESLPPSEKVVLVGHSFGGFSLALAMDKFPLKIALAVFLAAFVPDTRHPPSFVLDQHVERNHTEWLDNELSPSGSITFGSKFLYEKLYQLCSSEDLQLAKTLVRPGWLFLEELRKAENFSKEGYGSVPVAYIVCHEDLAIPMEFQRWMIQNACVDEVMEIMDADHMAMLSKPHQLFSALLHIANKYT 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1328 261 PANTHER METHYLESTERASE FAMILY MEMBER 12 258 IPR045889 -
Lele56g1328 261 Gene3D alpha/beta hydrolase 8 261 IPR029058 -
Lele56g1328 261 Pfam Alpha/beta hydrolase family 17 250 IPR000073 -
Lele56g1328 261 SUPERFAMILY alpha/beta-Hydrolases 10 259 IPR029058 -
Lele56g1328 261 FunFam (S)-hydroxynitrile lyase 11 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1328 Lele-ChrLele56 16549044 16550054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g1328 11 174 Miscellaneous Gene Families AT5G10300 49.711 1.55e-50 162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0236 49 1384216 1384618 Lele56g1328 56 16549044 16550054 CCT
Lele53g0104 53 758964 762572 Lele56g1328 56 16549044 16550054 hybridization