Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0236 ATGAACTTAGCCCTCTCCCTCGACCTCTTCCCACACAAAGTAGCCGTTGCTGTTTTCTTAACCGCCTTCCTCCCAGACACCCATCACAGACCTTCCTATGTCCTGGAAAAGTTTCAGCAGAGTTTCCCGACCGGTGCAGGTTGGTTAGACACTGAGTTCTCTAATCATTGTACTCTGTTGTTCGGTCCCAAGTTCTTGTCCTCCCATCTCTATCAACTCTGCCTCCCAGAGGATGTTTAA 240 0.4917 MNLALSLDLFPHKVAVAVFLTAFLPDTHHRPSYVLEKFQQSFPTGAGWLDTEFSNHCTLLFGPKFLSSHLYQLCLPEDV 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0236 79 Gene3D alpha/beta hydrolase 1 79 IPR029058 -
Lele49g0236 79 PANTHER METHYLESTERASE FAMILY MEMBER 1 79 IPR045889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0236 Lele-ChrLele49 1384216 1384618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0236 1 74 Miscellaneous Gene Families AT5G10300 50.617 5.52e-19 75.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0236 49 1384216 1384618 Lele53g0104 53 758964 762572 CCT
Lele49g0236 49 1384216 1384618 Lele55g1387 55 20268553 20269591 CCT
Lele49g0236 49 1384216 1384618 Lele56g1328 56 16549044 16550054 CCT
Lele49g0236 49 1384216 1384618 Lele51g0249 51 1406082 1407030 hybridization
Lele49g0236 49 1384216 1384618 Lele52g0252 52 1479023 1479541 hybridization