Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0213 ATGTGGCATATGGATTTCAAGCGTTCATTGTGGATTCCCGACACTTACAAATTGAAATTAAGGGGAGAAGAATACGATAGGATCATCAATGAAGAGGGCATGGAATCTAAGGAAATCAAGTTAACTAGGCTCGAGGATAACATCCATGATCATGGACTTTTCGTAGCAATATCCGTGACCGTGAACGCAAATTATGATCACCCATCATTTAGGACGCAGGATATCAACATACTCGCTTTCTTTAATCAGATCGTCTTTAGAAAGAGAAGATTCTCTGCGTTTGTTGAGATGACACGTACAGAAGGACATATGGTTTTGAGCAAGGAACATAAAAAAAGAAATAGCGCTACAAATTCCAGGCCCCCAGGCCTTGAGCATGAAATAGAAGGATGGAATGGGATAGCAACATTGTCTTCCTCAGTCGATCCTCATGCATCGAAGAAAAGGAAAGAGGGAAGTGTAATAAAACGGAAGAAGCTCCAATCTGTGGCCCCTCGACTCCGATGCAAGAAAATGCCCCAAAGTTTGATGTTTTTTCTGTTGCCTCGATTTCAGCATCAAGACCCCGATTATCCTGATTTCTCTGTAATTGGGGATTTTTGTTCATCTCGGATTCCCACCGAAGCAGCTACTTGGCCTCGCCACCGCTGTTTTACTTCAATTCGCAGCTCTCAACTTATCCTGAAATTTCATCTTCATTCCAGCTCCCTATTCGCACCAAAATTCGTCGTGATGGGAGGGAAATCCAGCAAGAATGTGCCTTTACCTATCAGAATGGGTACCAATTCCCAGGTCGCGGCTGATTTGAACTCGTACGAAGCTGCATGTATGGCCGACCCGAATTTGCAATCCTTCGACGCCAACTTTCGAGAGCGAACTAACAGGGTGATCAACTCGCTCGCCAGTAGGGTTCAGCTTCGCTCCTTACCTCTTGATTCTCTGAGAGAAGTGACTGATACTCTGCTAGAAAATCACGAGGAAGTAGTCAAAACCTTCCTGGCATGCAAGCACGATATATTGAAGAACAAAGACCTATCCTCCTTGGTTGACGAATTTTTCGTAAATAGCCTCTTGACATTGGATTTCTGTAATGAACTTCATAACTGCCTGGGACGGGCACGTGAAAACCAGGCAATAATCACGTCAGCGCTTAACCATTTTGAGGAAGAGGTCGGAAATGGGGTGGAAGGGGAGAGGTATAAAAAGACACTGGAGCTACTGAAGAGATTTACCGACGCCGGAGACCCCTTCACGAAGGATTTTTACTTGTTGTTTGAACGGGTTTATATTAAGCAGGTATCATTGCTGGAGAAACTGCAAGACAGAAAGAGAAAACTCGATAAGAAACTGAAATCCCTCAAGACATGGAGGAGGGTGTCAAATGCCATTTTTTTGACTGCATTCGTTTCTGTGTTGATTTTCTCTGTGGTGGCGGTTGCTGTCGCTGCACCACCCGTTGTAGCAGCTTTGGCCGGTGCATTGGCTGTTCCAATAGGCTCGGTGGGAAAATGGTGGGATTCACTATTTCAGGGATACGGGAAAGCCTTGAAAAGCGAAAGCGAATTGCTCAGCACAATGGAATTTCGTACCTATATCTCATTGCAGGACTTGAATAGCATTTGGTCCCTCGTTAACAAACTGGCAATAAAGATCGAGTCAATGTTGCCTACTGCTGATCTTGCTCTCCAGGATGAGGATGCTGTAGAGCTCGCAATCGACGAGATCAAGAAGCAGATGGAGCTTTTTGGCCAGAGTATTGACACCTTGAATGAGCATACTGATAAATGCAGTCGGGAGATAAGAAAAGCTAGGACAGTGGTTATACAAAGGATAATGGAGCCTCGAAGTTGA 1851 0.4468 MWHMDFKRSLWIPDTYKLKLRGEEYDRIINEEGMESKEIKLTRLEDNIHDHGLFVAISVTVNANYDHPSFRTQDINILAFFNQIVFRKRRFSAFVEMTRTEGHMVLSKEHKKRNSATNSRPPGLEHEIEGWNGIATLSSSVDPHASKKRKEGSVIKRKKLQSVAPRLRCKKMPQSLMFFLLPRFQHQDPDYPDFSVIGDFCSSRIPTEAATWPRHRCFTSIRSSQLILKFHLHSSSLFAPKFVVMGGKSSKNVPLPIRMGTNSQVAADLNSYEAACMADPNLQSFDANFRERTNRVINSLASRVQLRSLPLDSLREVTDTLLENHEEVVKTFLACKHDILKNKDLSSLVDEFFVNSLLTLDFCNELHNCLGRARENQAIITSALNHFEEEVGNGVEGERYKKTLELLKRFTDAGDPFTKDFYLLFERVYIKQVSLLEKLQDRKRKLDKKLKSLKTWRRVSNAIFLTAFVSVLIFSVVAVAVAAPPVVAALAGALAVPIGSVGKWWDSLFQGYGKALKSESELLSTMEFRTYISLQDLNSIWSLVNKLAIKIESMLPTADLALQDEDAVELAIDEIKKQMELFGQSIDTLNEHTDKCSREIRKARTVVIQRIMEPRS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0213 616 Pfam Protein of unknown function (DUF677) 282 611 IPR007749 -
Lele52g0213 616 PANTHER UPF0496 PROTEIN 3-RELATED 267 612 IPR007749 -
Lele52g0213 616 Coils Coil 436 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0213 Lele-ChrLele52 1262507 1266974 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0213 52 1262507 1266974 Lele53g0071 53 563484 564605 CCT
Lele52g0213 52 1262507 1266974 Lele54g0074 54 610892 612013 CCT
Lele52g0213 52 1262507 1266974 Lele55g1426 55 20503171 20504292 CCT
Lele52g0213 52 1262507 1266974 Lele56g1358 56 16737834 16738955 CCT
Lele49g0196 49 1173080 1174198 Lele52g0213 52 1262507 1266974 hybridization
Lele50g0210 50 1239083 1244947 Lele52g0213 52 1262507 1266974 hybridization