Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0210 ATGGAGCATGCTGATGAAAATCTCCTTCCATCTGTTTACAAAGAAGTTAGCGAAGCGTTTAATGCAGGACCATCTAACCTGGGGTACCTCACATTTATAAGGAACTTTATGCAGGGATTATCATCTCCCTTGGCAGGTATACTTGTTCTAAATCATGACCGGCCCACAATTCTTGCCATGGGCACTTTCTGCTGGGCTTTATCTACCGCCGTGGGTTTTAGCCACGATTTTCTGCAGGTTGCATTCTGGAGGGCAGTAAATGGTTTTGGTTTGGCAATTGTGATTCCAGCACTCCAATCTTTCATATCTGACAGCTACAGTGATGCTGTGAGGGGAACTGGGTTTGGATTACTAAGCCTTATTGGTATCGCAGGAGGTATAGGAGGTGGTGTTTTGGCTACAGTCATGGCTGGGCAGCAATTTTGGGGCATACCAGGATGGCGATGTGCCTTCATTTTAATGGCATCTTTGAGTGCATGGATTGGATTCCTTGTTTTAGTATATGTGGTTGATCCAAGAAAAAGAAATATCACGGTTTCTGATGCTAGTCAGAGTTCAGATAGGGATGAACTTATGGAGAAGGGCAATGCTAGTGCAGCATCAATTTGGATGGAATCTTGGGCTGCAATGAAAGCTGTGATGAAAGTTCCAACATTTCAAATCATTGTTTTACAGTGTATTGTTGGGTCACTGCCATGTTCCTATTACTACACCAGAATATCGAGCTGTAAGAGTGTTAACTATAGTTTCTCAAAGTTGCATTTGTTCAGCAAACTCCTTAGTCTCTTTGCTATTGGATGTGCTGTGGGATCCTTTATAGGTGGATCAATAGCTGATAAGCTGTCCCGTATCTATCCCCATTCTGGGCGACTCATGTTTGCACAATTCAGTGCCTTTATGGGTATTGCATTCTCATGGTTTCTTCTGAAGGTGATCCCTCAGTCAGTAAGCAGCTTTGCCATCACTCTCTTGATAATGGGTCTATGTATAAGCTGGAATGCTACAGCTGCGAATGCTCCAATGATCTATGCATTTGATCGCGCTTCTGAGGGATCTTTTTCTTCAGTTGCAGCTCCCTTGGGGGGCATTCTTTCTGAGAAGTGGTTTGTGTATGACTCTAAGTCCGTTGATTTTTCTAAAGGATCTGCTCCAGAGGCTCTTGCATTGTCCAAGGGCCTTCTTTCCAGGATGCTTTCAACTTATCCTGAAATTTCATCTTCATTCCAGCTTCTCACAGATCCGAGTCGTCCCATCCTTGAAAAGTTCATACTTTTGGGGGCATTTGCTGAAATTGGAGTCTATTCTTTCTCCCTATTTGCACCAAACTTCGTCGTGATGGGAGGGAAATCCAGCAAGAATGTGCCTTTACCTATCAGAATGGGTACCAATTCCCAGGTCGCGGCTGATTTGAACTCGTACGAAGCTGCATGTATGGCCGACCCGAACTTGCAATCCTTCGACGCCAACTTTCGAGAGCGAACTAACAGGGTGATCAACTCGCTCGCCAGTAGGGTTCAGCTTTGCTCCTTACCTCTTGATTCTCTGAGAGAAGTGACTGATACTCTGCTAGAAAATCACGAGGAAGTAGTCAAAACCTTCCTGGCATGCAAGCACGATATATTGAAGAACAAAGACCTATCCTCCGTGGTTGACGAATTTTTCGAAAATAGCCTCTTGACATTGGATTTCTGTAATGAACTTCATAAGTCCTTGGGACGGGCACGTGAAAACCAGGCAATAATCGCGTCAGCGCTTAAGCATTTTGAGGAAGAGGTCGGAAATGGGGTGGAAGGGGAGAGGTACAAAAAGACATTGGAGCTACTGAAGAGATTTACGGACGCCGGAGACCCCTTCACGAAGGATTTTTACTTGTTGTTTGAGCGGGTTTATATTAAGCAGGTATCATTGCTGAAGAAACTGCAAGACAGAAAGAGAAAACTCGATAAGAAACTGAAATCCCTCAAGACATGGAGGAGGGTGTCAAATGCCATTTTTTTGACTGCATTCGTTTCTGTGTTGATTTTCTCTGTGGTGGCGGTTGCTCTCGCTGCACCGCCTGTTGTAGCAGCTTTGGCCGGTGCATTGGCTGTTCCAATAGGCTCGGTAGGAAAATGGTGGAATTCACTATTTCAGGGATATGGGAAAGCCCTGAAAAGCGAAAGCGAATTGCTCAGCACAATGGAGTTCCGTACCTATATCACATTGCAGGACTTGAATAGCATTTGGTCCCTCGTCAACAAACTGGCAATAAAGATCGAGTCAATGTTGCCTACTGCTGATCTTGCTCTCCAGGATGAGGATGCTGTAGAGCTCGCAATCGATGATATCAAGAAGCAGATGGAGCTTTTTGGCCAGAGTATTGACACCTTGAACGAACATACTGATAAATGCAGTCGGGAGATAAGAAAAGCTAGGACAGTGGTTATACAAAGGATAATGGAACCTCGAAGTTGA 2454 0.4462 MEHADENLLPSVYKEVSEAFNAGPSNLGYLTFIRNFMQGLSSPLAGILVLNHDRPTILAMGTFCWALSTAVGFSHDFLQVAFWRAVNGFGLAIVIPALQSFISDSYSDAVRGTGFGLLSLIGIAGGIGGGVLATVMAGQQFWGIPGWRCAFILMASLSAWIGFLVLVYVVDPRKRNITVSDASQSSDRDELMEKGNASAASIWMESWAAMKAVMKVPTFQIIVLQCIVGSLPCSYYYTRISSCKSVNYSFSKLHLFSKLLSLFAIGCAVGSFIGGSIADKLSRIYPHSGRLMFAQFSAFMGIAFSWFLLKVIPQSVSSFAITLLIMGLCISWNATAANAPMIYAFDRASEGSFSSVAAPLGGILSEKWFVYDSKSVDFSKGSAPEALALSKGLLSRMLSTYPEISSSFQLLTDPSRPILEKFILLGAFAEIGVYSFSLFAPNFVVMGGKSSKNVPLPIRMGTNSQVAADLNSYEAACMADPNLQSFDANFRERTNRVINSLASRVQLCSLPLDSLREVTDTLLENHEEVVKTFLACKHDILKNKDLSSVVDEFFENSLLTLDFCNELHKSLGRARENQAIIASALKHFEEEVGNGVEGERYKKTLELLKRFTDAGDPFTKDFYLLFERVYIKQVSLLKKLQDRKRKLDKKLKSLKTWRRVSNAIFLTAFVSVLIFSVVAVALAAPPVVAALAGALAVPIGSVGKWWNSLFQGYGKALKSESELLSTMEFRTYITLQDLNSIWSLVNKLAIKIESMLPTADLALQDEDAVELAIDDIKKQMELFGQSIDTLNEHTDKCSREIRKARTVVIQRIMEPRS 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0210 817 PANTHER UPF0496 PROTEIN 3-RELATED 468 813 IPR007749 -
Lele50g0210 817 Pfam Major Facilitator Superfamily 7 358 IPR011701 GO:0022857|GO:0055085
Lele50g0210 817 Pfam Protein of unknown function (DUF677) 483 812 IPR007749 -
Lele50g0210 817 Gene3D MFS general substrate transporter like domains 5 371 IPR036259 -
Lele50g0210 817 Coils Coil 637 657 - -
Lele50g0210 817 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 444 IPR020846 GO:0022857
Lele50g0210 817 SUPERFAMILY MFS general substrate transporter 11 362 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0210 Lele-ChrLele50 1239083 1244947 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0210 50 1239083 1244947 Lele53g0071 53 563484 564605 CCT
Lele50g0210 50 1239083 1244947 Lele54g0074 54 610892 612013 CCT
Lele50g0210 50 1239083 1244947 Lele55g1426 55 20503171 20504292 CCT
Lele50g0210 50 1239083 1244947 Lele56g1358 56 16737834 16738955 CCT
Lele50g0210 50 1239083 1244947 Lele51g0212 51 1190991 1192109 hybridization
Lele50g0210 50 1239083 1244947 Lele52g0213 52 1262507 1266974 hybridization