Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0196 ATGGGAGGGAAATCCAGCAAGAATGTGCCTTTACCTATCAGAGTGGGTACCAGTTCCCAGGTGGCGGCTGATTTGAACTCGTACGAAGCTGCATGTATGGCCGACCCGAACTTACAATCCTTCGACGCCAACTTTCGAGAGCGAACTGACAGGGTGATCAACTCGCTCGCTAATAGGGTTCAGCTTCACTCCCTACCTCTTGATTCTCTGAGAGAATTGACTGATACTCTGCTAGAAAATCACGAGGAAGTAGTCAAAACCTTTCTGGCATGCAAGCACGATATATTGAAGAACAAAGACCTATCCTCCTTGGTTGACGAATTTTTCGAAAATAGCCTCTTGACATTGGATTTCTGTAATGAACTTCATAAGTGCTTGGGACGGGCACGTGAAAACCAGGCAATAATTACGTCAGCGCTTAACCATTTTGAGGAAGAGGTCGGAAATGGGGTGCAAGGGGAGAGGTATAAAAAGACATTGGAGCTACTGAAGAGATTTACCGACGCTGGAGACCCCTTCACGAATCAGTTTTACTTGTTGTTTGAGCGGGTTTATAGTAAGCAGGTATCGATGTTGGAGAAGCTGCAAGACAGAAAGAGAAAACTTGATAAGAAACTGAAATCCCTCAAGACATGGAGGAGGGTGTCAAATGCCATTTTTCTGACTGTGTTCATTTCTGTGTTGATTTTCTCGGTAGTGGCAGTTGCTGTTTCTGCACCGCCTGTTGTAGCAGCTTTGGCCGGTGCATTGGCTGTTCCAATAGGCTCAGTAGGAAAATGGTGTAATTCACTATTTCAGGGGTATGGGAAAGCCCTGAAAAGCCAAAGCGAAGTGCTCAGCACAATGGAGTTTCGTACCTATATCACATTGCAGGACTTGAAAAGCATTTGGTCCCTCGTCAACAAACTGGCAATAAAGATTGAGTCAATGTTGCCTACTGCTGATTTTGCTCTCCAGGATGAGGATGCTGTAGAGCTTGTAATCGATGAGATCAAGAAGCAGATGGAACTTTTTGGCCAGAGTATTGATGCTTTGAATGAGCATACTGATAAATGCAGTCGGGAGATAAGAAAAGCTAGGACAGTGGTTATACGAAGGATAATGGAACCTGGAAGCTGA 1119 0.4486 MGGKSSKNVPLPIRVGTSSQVAADLNSYEAACMADPNLQSFDANFRERTDRVINSLANRVQLHSLPLDSLRELTDTLLENHEEVVKTFLACKHDILKNKDLSSLVDEFFENSLLTLDFCNELHKCLGRARENQAIITSALNHFEEEVGNGVQGERYKKTLELLKRFTDAGDPFTNQFYLLFERVYSKQVSMLEKLQDRKRKLDKKLKSLKTWRRVSNAIFLTVFISVLIFSVVAVAVSAPPVVAALAGALAVPIGSVGKWCNSLFQGYGKALKSQSEVLSTMEFRTYITLQDLKSIWSLVNKLAIKIESMLPTADFALQDEDAVELVIDEIKKQMELFGQSIDALNEHTDKCSREIRKARTVVIRRIMEPGS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0196 372 PANTHER UPF0496 PROTEIN 3-RELATED 23 368 IPR007749 -
Lele49g0196 372 Pfam Protein of unknown function (DUF677) 38 367 IPR007749 -
Lele49g0196 372 Coils Coil 185 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0196 Lele-ChrLele49 1173080 1174198 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0196 49 1173080 1174198 Lele51g0212 51 1190991 1192109 hybridization
Lele49g0196 49 1173080 1174198 Lele52g0213 52 1262507 1266974 hybridization