Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1251 ATGAACAACAGTTTACAGCCACAACCTGCGAGACATAATGCTTTCGATTTCTGTCCCAACAACACTACAAAAGAGAAGGACAGTGACTCTCATATGGTAGAGGTAAGAGTTCCAAATCTGGACTGTGAGGGATGTGCTTCCAAGTTAAAGAAGGCTCTCTTCAAGCTTAAAGGAGTGGATGAGGTGTGGGTGAAGATAGAAGAACAGAAGGTAACAGTGAGAGGTCATGGAGTGGAATTGGAGAGGAAGGTGTTCAGGGCCATCAAGAGAGCTGGCAAAGCCGCTGAGCCATGGCCTTATTCTGGAGCCCTCTCTCACTTTACGACGTCCTTGCACAAGTACCCCACCTTCATCCTCAACCATTACTACCACGACTCCTCCAAATCTGAGGCCTCCAATGGCGTCCACACCTTCTTCCACACTCCTTCCCTCTACTCTGTCGCCGCCTCTTTGGATGAACCCTTCGCTTCCCTCTTCAGCGATGAAAACCCCCATGCCTGCACCCTCTCTGACGGATCTGAGTCAGACGATATTCAAAATTATTCTTCCAAGGTGGTGTTGAAGGTCATGACTATGACTGATGATAGGACGAAGCAGAAGGCAATTGAAGCAGCTGCAGATATCTATGGTGCTTCTAGTTCCTCCTCCTCCTTCTCTCAACAACTCAATATTTTCTGCCTTGAATAA 687 0.4774 MNNSLQPQPARHNAFDFCPNNTTKEKDSDSHMVEVRVPNLDCEGCASKLKKALFKLKGVDEVWVKIEEQKVTVRGHGVELERKVFRAIKRAGKAAEPWPYSGALSHFTTSLHKYPTFILNHYYHDSSKSEASNGVHTFFHTPSLYSVAASLDEPFASLFSDENPHACTLSDGSESDDIQNYSSKVVLKVMTMTDDRTKQKAIEAAADIYGASSSSSSFSQQLNIFCLE 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1251 228 SUPERFAMILY HMA, heavy metal-associated domain 32 99 IPR036163 GO:0046872
Lele48g1251 228 MobiDBLite consensus disorder prediction 1 30 - -
Lele48g1251 228 CDD HMA 34 96 IPR006121 GO:0046872
Lele48g1251 228 ProSiteProfiles Heavy-metal-associated domain profile. 32 97 IPR006121 GO:0046872
Lele48g1251 228 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 32 167 IPR045181 GO:0046872
Lele48g1251 228 MobiDBLite consensus disorder prediction 1 21 - -
Lele48g1251 228 Pfam Heavy-metal-associated domain 35 93 IPR006121 GO:0046872
Lele48g1251 228 Gene3D - 27 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1251 Lele-ChrLele48 16880158 16888173 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1251 48 16880158 16888173 Lele05g2106 05 15783413 15787472 CCT
Lele48g1251 48 16880158 16888173 Lele06g1934 06 14106285 14110854 CCT
Lele48g1251 48 16880158 16888173 Lele07g2142 07 15057311 15061347 CCT
Lele48g1251 48 16880158 16888173 Lele08g1935 08 13873838 13877895 CCT
Lele48g1251 48 16880158 16888173 Lele48g1251 48 16880158 16888173 ECH
Lele45g0191 45 1606158 1610107 Lele48g1251 48 16880158 16888173 hybridization
Lele46g0212 46 1340269 1342124 Lele48g1251 48 16880158 16888173 hybridization