Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1935 ATGTTTAAGTCATGGAGCAAGAAGAACAAGATCAAAGCTGTATTCAAATTGCAGTTTCAGGCAACTCAGGTGCCGAAGATGAAGAAGTCGGCGCTGATGATATCTCTGGTTCCAGATGATGTCGGGAAGCCGACGGTGAAACTAGAGAAAACGGAGGTGCAGGAAGGAACCTGCGTGTGGGAGAACCCGGTTTTCGAATCAGTTAAACTTATTAGGGATTCAAAATCCGGGAAAATACATGAGAAAATTTACCATTTCGTTGTTGCAACTGGATCTTCAAAATCTGGCTTTCTCGGAGAAGCTTCAGTTGATTTTGCAGATTTTATAGCAGAAACTGAGCCACTAACTGTTTCACTCCCGTTGAAGTTTGCTAATTCAGGTGCAATTTTACATGTGACGATTCAGAATGTAGAAGGATATACTGAACAAAGAAACATGGAAGATGGAGCTCTGGAGCTTTACAATGATGGAAGCCTGAATCATCAACTCAGCTTTTGCAGCACAGATGACAATTCTTATAATGCTGACGATGGTCACTTGACCAATACCAGATCTGGTTATACGGAAGAAAATGCCAATCCTGAGCTAGCTTCATCTTTCAGACAGAATAATGGAACTGTTCAGGCCAGTACTAAAGAAACCCATATGCGTAGGAGGTCAAATACTGACTGGTCATTGGGCTCAACATCAGATGGAAGTTTAGGTGATTGGACAAACGGCCTTGAAGATAATCCTCCAAAAGATAGATTACGAGATCATTCAAATAATGCCTCTGAAAGGCTCAAAAGTGAAATTGCTTCTCTAAAGAGGCAGGTAGAAGTATCAGAACTCGAGTTAGAATCACTTCGAAGGCAGGTGGCAAAAGAAAGCAGTAGAGGACAGAGTATGTCGGCACAAATAATCAGCCTCAGAGAGGAGAGAGATAGGTTGAAAACTAAATGCGAACTGCTTGAGTCCCAGCGAACGTCCAATGATGAGACCAAAACCCCAAAAACCTTACAGTCTGAGGTCAAAGATGTTAGGCTTCAGTTAAAATCGACTAGGGAAGAGCTTGTTTATGAAAAGGAGTTAAACACCAATCTTCAAATACAACTGCAGAAGACACAGAACTCGAATTCTGAGCTACTGTTGGCAGTAGAAGACCTTGAAGCAATGCTGGAACAGAAGAACAAAGAGATATCGGATCTTTCTAGAAAGTCCCGAAATATTACCAGTGAGCCTGTTGACACCACTGAAGTAGATCTTTTGAAACAGAAGATTGGTGAACTGGAAGGTGAAATAGATGCCTATAACAAGCAAAATGAAGTGCTAAACAAGGATATAACAGAGCTCACTTCGGAATATGAGCTTCTGAAGAAGGAGAACCTGGATATTTCTTTGAGATTGAAGCAAGAAGAAGCACAGCAAATTATGTTACAGAATGAAAACTCTGCTTCTTTGGCTACCATACAAAAACTAGATTCACAAGTAGAGATATTAGAAGGGAAGATAAAGCAGCAGGCAGATGAGATTTCAGAGTCTTTGGTCTATATCAATGAACTTGAAAGTCAAGTCAAGAGTTTGGAGAAAGAACTGAAAGTGCAGGTTGAGAAATTTGAAGATGATCTGAATGCTATGAAATGTGAAAATATTGAACAGGAAGAACGGGCAAAACAAGCTGAGGAGGCCTTGAAAAAGACAAGACAAAATAATGCTATCGCATCTGAACGTTTTGAGGAGGACTATAGAATGCTTTCAGTTCAAATGTTATCCAAAATTGAGGAAAATGAAAAGATGACAAAGAGAGCAGTTGCAGAAGCTGATGAATTGAGACAGCAGAACAAACTAATTGAAGAAATGCTCCAGAAGTGCAATCACGAGCTCAGACTTATCACAGATCAGAATGAGTTGAAACATCAAGAGCTCTTGAACCAAATAGACTTGAAAGAAAAAGAAATGGAACAAATGTCGAAAGAACTAGAAAAGAAATCTAAACAGCTTGAAGTAGCACAAAGGCATAGGAATGAGAAGGATGGGGCTTTCTCTGTTCAAATTCAAATGCTCAGATCTGAAATTAAAAATCTGATTGCAGAGGAGAATAAATTGGCCAAGTCAACGGAGCATGGGAAGGTGGTTACAGAGCAAGAAGAGCACAAAGAAATAAATGATCTGGAGAAGGAGATCCCGCTTAATGCCTTACTTTCAGAATTGCAAATCTTCAAGATGCAACATGACAAATTAAAACATAACATGCACAATGAACAGGTAGAGAAAGAGAATATGAAGAATAAGATATCTCAACTACAAAGAGAGATGAAGAAGAAGGAAGAAGAATTAAACATTATGGAAAAGAAGCTCAAGAACAACAAAGGGCGAGTTCCAGCTGCACATGTGAATTTGGCTTCCAGAGATGAATGTGCTGCAGCTCCATCTTCCACAAAGGCATCTGCCAAGAAACCTAAGGGAACAAATGCTACAAGCACCCCTAATGTCAAGTCTGAAGAAAACGGAACAGCTGGCAAGTCAGCAGGCGCTGAAGATTGTGTAGCACCAAACAGAAGTGAATCACAAAATGGTGAGTGCAATACGAATAAACTGATGGATGAAGTGGCGATGCTAAAGGACAGGAACAAAAATATGGAAAAAGAGCTGAAAGAGATGGAAGAGAGATACTCAGAGATTAGTCTTAAATTTGCCGAGGTAGAAGGTGAGAGACAACAGCTTGTTATGGCTGTACGGAATCTCAAAAATGGAAAGAAGAGCTAA 2745 0.4004 MFKSWSKKNKIKAVFKLQFQATQVPKMKKSALMISLVPDDVGKPTVKLEKTEVQEGTCVWENPVFESVKLIRDSKSGKIHEKIYHFVVATGSSKSGFLGEASVDFADFIAETEPLTVSLPLKFANSGAILHVTIQNVEGYTEQRNMEDGALELYNDGSLNHQLSFCSTDDNSYNADDGHLTNTRSGYTEENANPELASSFRQNNGTVQASTKETHMRRRSNTDWSLGSTSDGSLGDWTNGLEDNPPKDRLRDHSNNASERLKSEIASLKRQVEVSELELESLRRQVAKESSRGQSMSAQIISLREERDRLKTKCELLESQRTSNDETKTPKTLQSEVKDVRLQLKSTREELVYEKELNTNLQIQLQKTQNSNSELLLAVEDLEAMLEQKNKEISDLSRKSRNITSEPVDTTEVDLLKQKIGELEGEIDAYNKQNEVLNKDITELTSEYELLKKENLDISLRLKQEEAQQIMLQNENSASLATIQKLDSQVEILEGKIKQQADEISESLVYINELESQVKSLEKELKVQVEKFEDDLNAMKCENIEQEERAKQAEEALKKTRQNNAIASERFEEDYRMLSVQMLSKIEENEKMTKRAVAEADELRQQNKLIEEMLQKCNHELRLITDQNELKHQELLNQIDLKEKEMEQMSKELEKKSKQLEVAQRHRNEKDGAFSVQIQMLRSEIKNLIAEENKLAKSTEHGKVVTEQEEHKEINDLEKEIPLNALLSELQIFKMQHDKLKHNMHNEQVEKENMKNKISQLQREMKKKEEELNIMEKKLKNNKGRVPAAHVNLASRDECAAAPSSTKASAKKPKGTNATSTPNVKSEENGTAGKSAGAEDCVAPNRSESQNGECNTNKLMDEVAMLKDRNKNMEKELKEMEERYSEISLKFAEVEGERQQLVMAVRNLKNGKKS 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1935 914 Coils Coil 413 468 - -
Lele08g1935 914 Coils Coil 678 698 - -
Lele08g1935 914 Coils Coil 632 666 - -
Lele08g1935 914 Coils Coil 300 320 - -
Lele08g1935 914 MobiDBLite consensus disorder prediction 176 256 - -
Lele08g1935 914 MobiDBLite consensus disorder prediction 809 830 - -
Lele08g1935 914 Coils Coil 856 897 - -
Lele08g1935 914 Coils Coil 723 785 - -
Lele08g1935 914 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Lele08g1935 914 Coils Coil 586 620 - -
Lele08g1935 914 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Lele08g1935 914 MobiDBLite consensus disorder prediction 794 857 - -
Lele08g1935 914 Coils Coil 251 292 - -
Lele08g1935 914 Coils Coil 365 406 - -
Lele08g1935 914 MobiDBLite consensus disorder prediction 176 211 - -
Lele08g1935 914 Coils Coil 483 570 - -
Lele08g1935 914 MobiDBLite consensus disorder prediction 242 256 - -
Lele08g1935 914 MobiDBLite consensus disorder prediction 221 237 - -
Lele08g1935 914 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 850 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1935 Lele-ChrLele08 13873838 13877895 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0191 45 1606158 1610107 Lele08g1935 08 13873838 13877895 CCT
Lele46g0212 46 1340269 1342124 Lele08g1935 08 13873838 13877895 CCT
Lele48g1251 48 16880158 16888173 Lele08g1935 08 13873838 13877895 CCT
Lele05g2106 05 15783413 15787472 Lele08g1935 08 13873838 13877895 hybridization
Lele06g1934 06 14106285 14110854 Lele08g1935 08 13873838 13877895 hybridization