Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2106 ATGTTCAAGTCATGGAGCAAGAAGAACAAGATCAAAGCTGTATTCAAATTGCAGTTTCAGGCAACTCAGGTGCCGAAGATGAAGAAGTCGGCGCTGATGATATCTCTGGTGCCAGATGATGTCGGGAAGCCGACGGTGAAACTCGAGAAAACGGAGGTGCAGGAAGGAACCTGTGTGTGGGAGAACCCGGTTTTCGAATCATTCAAACTTGTCAGGGATTCAAAGTCCGGGAAAATACATGAGAAAATTTACCATTTCGTTGTTGCAACTGGATCTTCAAAATCTGGCTTTCTTGGAGAAGCTTCAGTCGATTTTGCAGATTTTATAGCAGAAACTGAGCCACTGACTGTTTCACTCCCGTTGAAGTTTGCTAATTCAGGTGCAATTTTACATGATGGTCACTTGGCCAATACCAGATCTGGTTATACTGAAGAAAATGCCAATCCCGAGCTAGCTTCATCGTTCAGACAGAATAATAGTGGAGCTGTTCAGGCTAGCACTAAAGAAACCCATATGCGTAGGAGGTCAAACACTGACTGGTCATTAGGCTCAACATCAGATGGAAGCTTAGGTGACTGGACAAATAGCCTTGAAGATAATTCTTCAAAAGATAGATTTCGAGATCATTCAGATAATGCCTCTGAAAGGCTCAAAAGTGAAATTGCTTCTCTAAAGAGGCAGGTAGAAGTATCAGAACTTGAGTTAGAATCACTTCGAAGTCAGGTGACAAAAGAAAGCAGTAGAGGACAGGGTATGTCGGCACAAATAATCAGCCTCAGAGAGGAGAGAGATATGTTGAAAACTAAATGCGAACAGCTTGAGTCCCAGCGAACGTCGATTGATGAGACCAAAACCTCAAAAACCTTGCAGTCTGAGGTCAAAGATGTTAGGCTTCAGTTAAAATCAACTAGGGAAGAGCTTGTTTATGAAAAGGAGTTAAACACCAATCTTCAAATACAACTGCAGAAGACACAGAACTCGAATTCTGAGCTACTATTGGCAGTAGAAGACCTGGAAGCAATGCTGGAACAGAAGAACAAAGAGATATCGGATCTCTGTAGAAAGTCCCGAAATATTACCAATGAGCCTTTCGACACCACAGAAGTAGATATTTTGAAACAGAAGATTGCTGACTTGGAAGGTGAAATAGACGCCTATAACAGGCAAAATGAAGAGCTAAACAAGGATAACACAGAGCTCACTTCAGAATATGAGCTTCTGAAGAAGGAAAGCCTGGATATTTCTTTGAGATTGAAGCAAGAAGAAGCACAGCAAATTATGTTACAGAATGAAAACTCTGCTTCTTTGGCTACTATACAAAAACTATATTCACAAGTAGAGATATTAGAAGGAAAAATAAACCAGCAGGCGGATGAGATTTCAGAGTCTTGGGTCTATATCAATGAACTTGAAAGTCAAGTCAAGAGTTTGGAGAAAGAACTGAAAATGCAGGCTGAGAAATTTGAAGATGATAGGAATGCTATGAAATGTGCAAAAATTGAACAGGAAGTACGGGCAAAACAAGCTGAGGAGGCCTTGAAAAAGACAAGACAAAATAATGCTATCGCGTCTGAACGTTTTGAGGAAGAATATAGAATGCTTTCAGTTGAAATGTCATCCAAAATTGAGGAAAATGAAAAGATGACAAAGAGAGCAGTTGCAGAAGCTGATGAATTGCGACAGCAGAACAAACTAATTGAAGAAATGCTCCAGAAGTGCAATCAGGAGCTCAGGCTTATCACAGATCAGAATGAGTTGAAACATCAAGAGCTCTTAAACCAAATAGACTTGAAAGAAAAAGAAATGGAACGAATGTCGAAAGAACTAGAAAACAAATCTAAACAGCTTGAAGAAGCACAAAGGCACAAGAATGAGAAGGATGAGGCTTTCTCTGTTCAAATTCAAATGCTCAGATCTGAAATTAAAAAGCTGATGGCAGAGGAGAATGATCTGAAGAAGCACAAAGAAATAAATGATCTGGAGGAGGAGATCCCGTTTAGTGCCTTACTTTCAGAATTACAAATCTTCAAGAAGCAACATGACAAATTAAAACATAACATGCACAATGAACAGGTAGAGAAAGAGAATATGAAGAACAAGATATCTCAACTACAAAGAGAGATGAAGAAGAATGAAGAAGAATTAAACATTATGGAAAAGAAGCTCAAGAACAACAAAGGACGAGTTCCAGCTGCACATGTGAATTTGGCTTCCAGAGATGAATGTGCTGCAGCTCCATTTTCCACAAAGGCATCTGCCAAGAAACCTAAGGGAACAAATGCTACAAGCATCCATAATGGCAAGTCTGAAGACGCTGACGTTCGGGTAGCACCAAACAGAAGTGAATCACAGACCTGCTTCCATGATAATGAAAATGGCGAGTGCAATACGAGTAAACTGATGGATGAAGTGGCGATGCTAAATGACAGGAACAAAAATATGGAAAAAGAGCTCAAAGAGATGGAAGAGAGATACTCAGAGATTAGTCTTAAATTCGCCGTGGTAGAAGGTGAAAGACAACAGCTTGTTATGGCTGTACGGAATCTCAAAAATGGAAAGAAGAACTAA 2568 0.3999 MFKSWSKKNKIKAVFKLQFQATQVPKMKKSALMISLVPDDVGKPTVKLEKTEVQEGTCVWENPVFESFKLVRDSKSGKIHEKIYHFVVATGSSKSGFLGEASVDFADFIAETEPLTVSLPLKFANSGAILHDGHLANTRSGYTEENANPELASSFRQNNSGAVQASTKETHMRRRSNTDWSLGSTSDGSLGDWTNSLEDNSSKDRFRDHSDNASERLKSEIASLKRQVEVSELELESLRSQVTKESSRGQGMSAQIISLREERDMLKTKCEQLESQRTSIDETKTSKTLQSEVKDVRLQLKSTREELVYEKELNTNLQIQLQKTQNSNSELLLAVEDLEAMLEQKNKEISDLCRKSRNITNEPFDTTEVDILKQKIADLEGEIDAYNRQNEELNKDNTELTSEYELLKKESLDISLRLKQEEAQQIMLQNENSASLATIQKLYSQVEILEGKINQQADEISESWVYINELESQVKSLEKELKMQAEKFEDDRNAMKCAKIEQEVRAKQAEEALKKTRQNNAIASERFEEEYRMLSVEMSSKIEENEKMTKRAVAEADELRQQNKLIEEMLQKCNQELRLITDQNELKHQELLNQIDLKEKEMERMSKELENKSKQLEEAQRHKNEKDEAFSVQIQMLRSEIKKLMAEENDLKKHKEINDLEEEIPFSALLSELQIFKKQHDKLKHNMHNEQVEKENMKNKISQLQREMKKNEEELNIMEKKLKNNKGRVPAAHVNLASRDECAAAPFSTKASAKKPKGTNATSIHNGKSEDADVRVAPNRSESQTCFHDNENGECNTSKLMDEVAMLNDRNKNMEKELKEMEERYSEISLKFAVVEGERQQLVMAVRNLKNGKKN 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2106 855 Coils Coil 797 831 - -
Lele05g2106 855 CDD C2 50 121 - -
Lele05g2106 855 MobiDBLite consensus disorder prediction 749 776 - -
Lele05g2106 855 Coils Coil 680 728 - -
Lele05g2106 855 Coils Coil 467 494 - -
Lele05g2106 855 MobiDBLite consensus disorder prediction 198 215 - -
Lele05g2106 855 Coils Coil 499 526 - -
Lele05g2106 855 Coils Coil 542 583 - -
Lele05g2106 855 MobiDBLite consensus disorder prediction 151 167 - -
Lele05g2106 855 Coils Coil 286 306 - -
Lele05g2106 855 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 792 855 - -
Lele05g2106 855 MobiDBLite consensus disorder prediction 753 767 - -
Lele05g2106 855 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 131 IPR019448 -
Lele05g2106 855 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Lele05g2106 855 MobiDBLite consensus disorder prediction 177 197 - -
Lele05g2106 855 Coils Coil 369 410 - -
Lele05g2106 855 Coils Coil 207 241 - -
Lele05g2106 855 MobiDBLite consensus disorder prediction 151 215 - -
Lele05g2106 855 Coils Coil 321 362 - -
Lele05g2106 855 Coils Coil 256 276 - -
Lele05g2106 855 Coils Coil 634 654 - -
Lele05g2106 855 Coils Coil 439 459 - -
Lele05g2106 855 Coils Coil 588 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2106 Lele-ChrLele05 15783413 15787472 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0191 45 1606158 1610107 Lele05g2106 05 15783413 15787472 CCT
Lele46g0212 46 1340269 1342124 Lele05g2106 05 15783413 15787472 CCT
Lele48g1251 48 16880158 16888173 Lele05g2106 05 15783413 15787472 CCT
Lele05g2106 05 15783413 15787472 Lele07g2142 07 15057311 15061347 hybridization
Lele05g2106 05 15783413 15787472 Lele08g1935 08 13873838 13877895 hybridization