Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0212 ATGAACAACAGTTTACAGCCACAAACCTGCGAGACATATGCTTTCGATTTCTGTCCCAACAACACTACAAAAGAGAAGGACAGTGACTCTCATATGGTAGAGGTAAGAGTTCCAAATCTGGACTGTGAGGGATGTGCTTCCAAGTTAAAGAAGGCTCTCTTCAAGCTTAAAGGAGTGGATGAGGTGGAGGTGGAGATAGAAGAACAGAAGGTAACAGTGAGAGGTCATGGAGTGGAATTGGAGAGGAAGGTGTTGAGGGCCATCAAGAGTGCGGGCAAAGCCGCTGAGCCATGGCCTTATTCTGGAGCCCTCTCTCACTTTACGACGTCGTTGCACAAGTACCCCACCTTCATCCTCAACCATTACTACCACGACTCCTCCAAATCTGAGGCCTCCAATGGCGTCCACACCTTCTTCCACACTCCTTCCCTCTACTCCGTCGCCGCCTCTTCGGATGAACCCTTCGCTTCCCTCTTCAGCGATGAAAACCCCCATGCCTGCACCCTCACGTAA 513 0.5049 MNNSLQPQTCETYAFDFCPNNTTKEKDSDSHMVEVRVPNLDCEGCASKLKKALFKLKGVDEVEVEIEEQKVTVRGHGVELERKVLRAIKSAGKAAEPWPYSGALSHFTTSLHKYPTFILNHYYHDSSKSEASNGVHTFFHTPSLYSVAASSDEPFASLFSDENPHACTLT 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0212 170 Pfam Heavy-metal-associated domain 35 93 IPR006121 GO:0046872
Lele46g0212 170 Gene3D - 27 95 - -
Lele46g0212 170 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 32 167 IPR045181 GO:0046872
Lele46g0212 170 SUPERFAMILY HMA, heavy metal-associated domain 28 101 IPR036163 GO:0046872
Lele46g0212 170 ProSiteProfiles Heavy-metal-associated domain profile. 32 97 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0212 Lele-ChrLele46 1340269 1342124 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0212 46 1340269 1342124 Lele05g2106 05 15783413 15787472 CCT
Lele46g0212 46 1340269 1342124 Lele06g1934 06 14106285 14110854 CCT
Lele46g0212 46 1340269 1342124 Lele07g2142 07 15057311 15061347 CCT
Lele46g0212 46 1340269 1342124 Lele08g1935 08 13873838 13877895 CCT
Lele46g0212 46 1340269 1342124 Lele46g0212 46 1340269 1342124 ECH
Lele46g0212 46 1340269 1342124 Lele48g1251 48 16880158 16888173 hybridization