Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1017 ATGGCTACGAACACGAAACTCGCTGAGATGGGATCTTTCAGGTACTCTTTCTCGGACAAGAGGGAGAGGCTGCGCTCCATGAAAGGGTACTCTCATATAGGGATCAATATTCCGGAATCCGACGAAGAAGAAGCTCGCTCCAGGAGGAGGTTTTGTTCTTACCGTGCTTTCGTCGACGGCATTATCGACGGCTGGAAGGCACTCAAGAGTATTACTTCTAGGGCATGGGAGATGGGTCACAATGATCCCCGGAAGGTCATATTCTCTGCGAAAGTGGGATTTGGGTTGATGCTCCTCTCCTTGTTGATTTCTTTAAAGAGAGCAACACTTACCAAAGGGTTTAACAGAGGATCGGGGACTTTGTCTGCTGCAGGACTGGCTTTGGGAATGGCAAAGATATCAGAGTGGGCTGGAGAATGGGAAGAAGCTGTTCTTGTTATTGGTACCTTCATTGTAGTCCTGGTTTCCAATCACGTTCCTATGGGATTTGCTGTGTGGGAGCCACCTCATGGTCGTTACAAAATGCTTAGATATCTTCGGAAGAACTATGTGAAAGTAAGTGGAGCACTAAGGCATGCTGCATTTACGGTCTTGGACACTTGCTTTGACTGTGCCTTGTATGCTTCTGATATGGACCATTCAGATCAAATCTAG 654 0.4709 MATNTKLAEMGSFRYSFSDKRERLRSMKGYSHIGINIPESDEEEARSRRRFCSYRAFVDGIIDGWKALKSITSRAWEMGHNDPRKVIFSAKVGFGLMLLSLLISLKRATLTKGFNRGSGTLSAAGLALGMAKISEWAGEWEEAVLVIGTFIVVLVSNHVPMGFAVWEPPHGRYKMLRYLRKNYVKVSGALRHAAFTVLDTCFDCALYASDMDHSDQI 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1017 217 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 161 199 - -
Lele48g1017 217 Pfam Aluminium activated malate transporter 76 105 IPR020966 GO:0015743
Lele48g1017 217 Pfam Aluminium activated malate transporter 108 155 IPR020966 GO:0015743
Lele48g1017 217 Pfam Aluminium activated malate transporter 161 198 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1017 Lele-ChrLele48 15169043 15173078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1017 161 198 Miscellaneous Gene Families AT3G18440 68.421 2.99e-12 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele47g0955 47 15589633 15608256 Lele48g1017 48 15169043 15173078 ECH
Lele48g1017 48 15169043 15173078 Lele48g1017 48 15169043 15173078 ECH
Lele45g0448 45 3480184 3494291 Lele48g1017 48 15169043 15173078 hybridization
Lele46g0469 46 3199095 3201581 Lele48g1017 48 15169043 15173078 hybridization