Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0955 ATGGCTACGAACACGAAATTCGCTAAGATGGGATCTTTCAGGTACAGTTTCGCGGAGAAGAGAGAGAGGCTGCTCTCCGTGAAAGGGTATTCTCAGATAGGGATCAATATTCCGGAATCCGACGAAGATGAAACTCGCTCAAAGAGGAGATGTTGTTCTTACCGTGCTTTCTCCGACGGCATTATCGACGGTTGGAAGGCACTCAAGAGGATTGCTGCTAGGGCATGGGAGATGGGTCACAATGATCCCAGGAAGGTCATATTTTCTGCAAAAGTGGGATTTGGGTTGATGCTCCTTTCCCTGTTGATTTTCTTTAAAGAGTCCTTCAATGAGATGAGTCAATATTGTGTCTGGTCTATAATGACTGTCGTCGTCGTCTTTGAATTCAGCATAGGAGCAACACTTAGCAAAGGGTTTAACAGAGCATTGGGAACTTTGTCTGCTGCAGGACTGGCTTTAGGAATGGCAAAGTTATCTGAGTGGGCTGGAAACTGGGAAGAAGCTGTTATTGTTATTGGTACCTTCATTGTAGGATTTTGTATCACCTACGCGAAACTATATCCCCCGATGAAGGCTTATGAATATGGATTTCGTGTGTTCTTGATCACATATTGCTTAGTTACAATATCTGGTTATCATACCAGGGAATTCATTCATACAGCTACAAACAGATTTTTGTTCATTGCAATCGGTGCTTCTGTTGCCTTGGTAGTTAATATTTGTATATATCCAATCTGGGCCGGTGAAGATCTGCATAATTTGGTAGCAAAAAACTTTATGGGTGTAGCAAGATCTTTGGAAGCTTCTGTGAATAGTTACCTTAGCTGTGTTGAATATGAGAGGGTGCCTTCAAAAATTCTTACTTACCAGGCTTCTGCTGATGACATAATTTACAGTGGCTACAGATCAGCCGTTGAATCTATAGGCCAAGAGGAAACATTGATGGGATTTGCTGTGTGGGAGCCACCTCATGGTCGTTACAAAATGCTTAAATATCCTTGGAAGAACTATGTAAAATTAAGTGGAGCACTAAGGCATGCTGCATTTACCGTCTTGGGTATGCATGGGTGTATACTTTCTGAATTACAGGCTCCACCTGAGAAGCGAGAAGTCTTTAAAAGTGAGATTCAAAGGGTGGGCTATGAAGGAGCCAAATTGTTGCGTGAACTTGGAAACAAAGTTAAGAACATGGAGAAACTAGGTGAGGAAGACATTCTGTACGAAATACAGGAGGCGGCTGAACAACTCCAAGAGAAGATCGACAAAAAATCTTACCTTCTCGTGGATTCAGAGAGCTGGGAAATAGGCAACCGGCCTAGAGTCACCGGTGAAACACACGACCTCATGAACATGGATGAACATAGACCTCCAAAATTCCTGTACAGGTCTATGAGTGACAATATTCTAGACCTCAAATCAGGTCAAGCTCAGAAAAATTTGGACAATAGTATTTCTGCTGAGCTTTTACCTTCCTATGTGGCTGCTAATGACAACCGTCCTGCAAATAAGAAGATATCTTGGCCTGCAAATGTCTCTTTTAAAGCAGATGCAGTGATAGTGGAGGACGAATCAAAGGTATATGCGAGTGCTAGTTCACTGTCTCTTGCTACATTCACAACTCTTATGATTGAGTTTGTGGCGAGGCTCCATAACGTTGTTGATGCATTTGAAGAATTAGGTGAGGTGGCCAAGTTTAAGGATCCTCTTGAACAGCAAACTCCACAAACTGGGTTTTGGACAAGATTGTGAATTATTTTGAGGATCTCACGAGACAACATGGCTGCTGTGAATGAACCTCTATACCCGATAGCTGTTTTGATTGATGAATTGAAGAACGATGATATTCAGATTAGACTGAATTCGATTCGCAAGCTATCCACAATTGCACGCGCACTTGGGGAAGACAGGACCAGGACGGAATTGATTCCATTTCTCAGTGAGAACAATGATGATGATGATGTGGTGCTTCTTGCAGTGGCAGAGGAATTAGGCGTGTTTATACCATATGTTGGTGGCATAGAGCACGTGGACGTGCTGCTTCCTCCATTAGAAACGCTCTGCACCGTTGAGGAAACTTTTGTGAGGGACAAAGCAGTGGAGTCACTTTGTAAAATTGGAGCTCAAATGAGAGAGAAAGAAATGGTTGAATACTTCATTCCTCTAGTTAAGAGACTGGCTGCTGGTGAGTGGTTTACAGCTCGAGTTTCATCATGCGGCTTGTTGCATATTGCTTACCCTTATGCAGCAGGGACTATAAAAACTGAAATGAGAACTTTATATGGCAAGTTGTGCCAAGATGATATGCCTATGGTTAGAAGATCTGCTGCAACAAACCTGGGAAAGTTTGCTGCTACTGTTGAAGCTGATTACCTGAAAACCAATATCATGTCCGTATTTGAGGATCTTGCACAGGATGATAATGAGTCTCAAACCATTGACATTGTTGATCAAGATTCAGTTCGGCTACTTTCTGTTGAGGGTTGTGTAGCTCTTGGGAAATTGTTAGAGCCTCAAGATTGGGTGGCACATATTCTTCCAGCTATAGTCAAATTCTCACAGGATTTATCTGCAGATTCATCTCAGTATGTTCGCTCTTCATTAGCTTCAGTTGAGGTGACAATTGAGCAGCTCCTCCCTATTTTTCTTTCTCTTCTGAAAGATGAATGTCCTGATGTCAGGCTGAACATCATCAGCAAACTTGACCAAGTTAATCAGGTAATTGGTATTGACTTATTATCCCAGTCTCTATTGCCAGCTATTGTTGAGCTTGCCGAAGATCAACACTGGAGGGTTCGACTTGCCATCATAGAATATATACCCTTATTGGCAAGTCAATTGGGTGTAGGGTTTTTTGATGATAAACTTGGACCCCTTTGTATGCAATGGCTTAAGGACAAGGTATACTCTATTCGAGATGCGGCTGCTAGTAATGTGAAACGCTTAGCAGAAGAGTTTGGACCAGAATGGGCAATGGAGCACATTATTCCTCAGGTTCTGGACATGATTAATGATCCACACTATCTGAATCGGATGATTGTTCTGCAAGCAATTTCTCTTCTGGGTCCTGTTTTGGGCTCTGGGATTACCTGTTCAAAACTGCTCCCTCTGGTCATCACTGCATCAAAAGATAGGGTTCCCAATATCAAGTTCAATGTTGCAAAAGTGTTGCAGTCTCTTGCTCCAGTTGTTGATCATTCTGTTGTCGAGCAGACTATTTGTCCCTGTTTGGTTGAGCTCAGCGAGGATCCAGATGTCGATGTTCGGTTCTTTGCCTCCCAAGCGCTTCAATCTAGCAATGAAATCATGATTCTTCCATTATATGGACTCACTATTATTGAAGTCTGGGATACTTTTATGGAAATAATTGGATGGAGAGAGGGGAATGAAGAACTCTTGTACCATTACGTCAAGGCTATTGATGAAAGATTCTTTGATAGGGAAGTGATTGGATAG 3453 0.4234 MATNTKFAKMGSFRYSFAEKRERLLSVKGYSQIGINIPESDEDETRSKRRCCSYRAFSDGIIDGWKALKRIAARAWEMGHNDPRKVIFSAKVGFGLMLLSLLIFFKESFNEMSQYCVWSIMTVVVVFEFSIGATLSKGFNRALGTLSAAGLALGMAKLSEWAGNWEEAVIVIGTFIVGFCITYAKLYPPMKAYEYGFRVFLITYCLVTISGYHTREFIHTATNRFLFIAIGASVALVVNICIYPIWAGEDLHNLVAKNFMGVARSLEASVNSYLSCVEYERVPSKILTYQASADDIIYSGYRSAVESIGQEETLMGFAVWEPPHGRYKMLKYPWKNYVKLSGALRHAAFTVLGMHGCILSELQAPPEKREVFKSEIQRVGYEGAKLLRELGNKVKNMEKLGEEDILYEIQEAAEQLQEKIDKKSYLLVDSESWEIGNRPRVTGETHDLMNMDEHRPPKFLYRSMSDNILDLKSGQAQKNLDNSISAELLPSYVAANDNRPANKKISWPANVSFKADAVIVEDESKVYASASSLSLATFTTLMIEFVARLHNVVDAFEELGEVAKFKDPLEQQTPQTGFWTRLXIILRISRDNMAAVNEPLYPIAVLIDELKNDDIQIRLNSIRKLSTIARALGEDRTRTELIPFLSENNDDDDVVLLAVAEELGVFIPYVGGIEHVDVLLPPLETLCTVEETFVRDKAVESLCKIGAQMREKEMVEYFIPLVKRLAAGEWFTARVSSCGLLHIAYPYAAGTIKTEMRTLYGKLCQDDMPMVRRSAATNLGKFAATVEADYLKTNIMSVFEDLAQDDNESQTIDIVDQDSVRLLSVEGCVALGKLLEPQDWVAHILPAIVKFSQDLSADSSQYVRSSLASVEVTIEQLLPIFLSLLKDECPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDQHWRVRLAIIEYIPLLASQLGVGFFDDKLGPLCMQWLKDKVYSIRDAAASNVKRLAEEFGPEWAMEHIIPQVLDMINDPHYLNRMIVLQAISLLGPVLGSGITCSKLLPLVITASKDRVPNIKFNVAKVLQSLAPVVDHSVVEQTICPCLVELSEDPDVDVRFFASQALQSSNEIMILPLYGLTIIEVWDTFMEIIGWREGNEELLYHYVKAIDERFFDREVIG 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0955 1150 ProSiteProfiles HEAT repeat profile. 955 993 IPR021133 -
Lele47g0955 1150 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 853 1099 - -
Lele47g0955 1150 Gene3D - 594 1097 IPR011989 -
Lele47g0955 1150 Pfam Aluminium activated malate transporter 76 560 IPR020966 GO:0015743
Lele47g0955 1150 ProSiteProfiles HEAT repeat profile. 994 1032 IPR021133 -
Lele47g0955 1150 ProSiteProfiles HEAT repeat profile. 1072 1102 IPR021133 -
Lele47g0955 1150 Pfam HEAT repeats 879 978 - -
Lele47g0955 1150 ProSiteProfiles HEAT repeat profile. 756 794 IPR021133 -
Lele47g0955 1150 ProSiteProfiles HEAT repeat profile. 602 640 IPR021133 -
Lele47g0955 1150 SUPERFAMILY ARM repeat 600 1096 IPR016024 -
Lele47g0955 1150 ProSiteProfiles HEAT repeat profile. 1033 1071 IPR021133 -
Lele47g0955 1150 ProSiteProfiles HEAT repeat profile. 916 954 IPR021133 -
Lele47g0955 1150 ProSiteProfiles HEAT repeat profile. 877 915 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0955 Lele-ChrLele47 15589633 15608256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0955 8 568 Miscellaneous Gene Families AT3G18440 56.971 0.0 656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele47g0955 47 15589633 15608256 Lele48g1017 48 15169043 15173078 ECH
Lele47g0955 47 15589633 15608256 Lele47g0955 47 15589633 15608256 ECH
Lele45g0448 45 3480184 3494291 Lele47g0955 47 15589633 15608256 hybridization
Lele46g0469 46 3199095 3201581 Lele47g0955 47 15589633 15608256 hybridization