Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0448 ATGGCTACGAACACGAAATTCGCTAAGATGGGATCTTTCAGGTACAGTTTCGTGGAGAAGAGGGAGAGGCTGCTCTCCGTGAAGGGGTATTCTCAGATAGGGATCAATATTCCGGAATCTGACGAAGATGAAACTCGCTCAAAGAGGAGATGTTGTTCTTACCGTGCTTTCAATGACGGCATTATCGACGGTTGGAAGGCACTCAAGAGGATTGCTGCTAGGGCATGGGAGATGGGTCACAATGATCCCAGGAAGGTCATATTCTCTGCGAAAGTGGGATTTGGGTTGATGCTCCTTTCCTTGTTGATTTTCTTTAAAGAGTCCTTCAATGAGATGAGTCAATATTGTGTCTGGTCTATAATGACTGTCGTCGTCGTCTTTGAATTCAGCATAGGAGCAACACTTAGCAAAGGGTTTAACAGAGCATTGGGGACTTTGTCTGCTGCAGGACTGGCTTTAGGAATGGCAAAGTTATCTGAGTGGGCTGGAAACTGGGAAGAAGCTGTTATTGTTATTGGTACCTTCATTGTAGGATTTTGTATCACCTACGCGAAACTATATCCCCCGATGAAGGCTTATGAATATGGATTTCGTGTGTTCTTGATCACATATTGTTTAGTTACAATATCTGGTTATCATACCAGGGAATTCATTCATACAGCTACAAACAGATTTTTGTTCATTGCAATCGGTGCTGCTGTTGCCTTGGTAGTTAATATTTGTATATATCCAATCTGGGCCGGTGAAGATCTGCATAATTTGGTAGCAAAAAACTTTATGGGTGTAGCAAGATCTTTGGAAGCTTCTGTGAATAGTTACCTTAGCTGTGTTGAATATGAGAGGGTGCCTTCAAAAATTCTTACTTACCAGGCTTCTGCTGATGACATAATTTACAGTGGCTACAGATCAGCCGTTGAATCTATAGGTCAAGAGGAAACATTGATGGGATTTGCTGTGTGGGAGCCACCTCATGGTCGTTACAAAATGCTTAAATATCCTTGGAAGAACTATGTAAAATTAAGTGGAGCGCTGAGGCATGCTGCATTTACGGTCTTGGGTATGCATGGGTGTATACTTTCTGAATTACAGGCTCCACCTGAGAAGCGAGAGGTCTTTAAAAGTGAGATTCAAAGGGTAGGCTATGAAGGAACCAAATTGTTGCGTGAACTAGGAAACAAAGTTAAGAACATGGAGAAACTAGGTGAGGAAGACATTCTGTACGAAATACAGGAGGCGGCCGAACAACTCCAAGAGAAGATCGACAAAAAATCTTACCTTCTCGTGGATTCAGAGAGCTGGGAAATAGGCAACCGGCCTAGAGTCACCGGTGAAACACACGACCTCATGAACATGGATGAACATAGACCTCCAAAATTCCTGTACAGGTCTATGAGTGACACTATTCTAGACCTCAAATCAGGTCAAGCTCAGAAAAATTTGGACAATAGTATTTCTACTGAGCTTTTACCTTCCTATGTGGCTGCTAATGACAACCGTCCTGCAAATATGAAGATATCTTGGCCTGCACATGTCTCTTTTAAAGCAGATGCAGTGATAGTGGAGGACGAATCAAAGGTATATGCGAGTGCTAGTTCACTGTCTCTTGCTACATTCACAACTCTTATGATTGAGTTTGTGGCGAGGCTCCATAACGTTGTTGATGCATTTGAAGAATTAGGCGAGGTGGCCAAGTTTAAGGATCCTCTTGAACAGCAAACTCCACAAACTGGGTTTTGGACAAGATTGTGTGATTGCTTGAGTTTTTTGAGGATCTCGCGAGACAACATGGCTGCTGTGAATGAACCTCTATACCCGATAGCTGTTTTGATTGATGAATTGAAGAACGATGATATTCAGATTAGACTGAATTCGATTCGCAAGCTATCCACAATTGCACGCGCACTTGGAGAAGAAAGGACCAGGACGGAATTGATTCCATTTCTCAGTGAGAACAATGATGATGATGATGTGGTGCTTCTTGCAGTGGCAGAGGAATTAGGCGTGTTTATACCATATGTTGGTGGCATAGAGCACGCGGACGTGCTGCTCCCTCCATTAGAAACGCTCTGCACCGTTGAGGAAACTTGTGTGAGGGACAAAGCAGTGGAGTCACTTTGTAAAATTGGAGCTCAAATGAGAGAGAAAGAAATGGTTGAATACTTCATTCCTCTAGTTAAGGGTTCAGTTAATGTTTGTTATCTTCCTTCCCATGTTAATTCTTTTCTGCCTACTACTCGCTTGCTTGTCCCATTCATCTTCACCTCCTCTTCATTAAAAAAGAGACTGGTTGCTGGTGAGTGGTTTACAGCTCGAGTTTCATCATGCGGCTTGTTGCATATTGCTTACCCTTATGCACCAGAGACTATGAAAACTGAAATGAGAACTTTATATCGCAAGTTGTGCCAAGATGATATGCCTATGGTTAGAAGATCTGCCGCAACAAACCTGGGAAAGTTTGCTGCTACAGTTGAAGCCGATTACCTGAAAACCAATATCATGTCCATATTTGAGGATCTTGCACAGGATGATCAAGATTCAGTTCGGCTACTTTCTGTTGAGGGTTGTGTAGCTCTTGGGAAATTGTTGGAGCCTCAAGATTGTGTGGCACATATTCTTCCAGCTATAGTCAAATTCTCACAGGATTTATCTGCAGATTCATCTCAGTATGTTCGCTCTTCATTGGCTTCAGTTGTAATGGGAATGGCACCGCTTTTAGGGAAGGAGGTGACAATTGAGCAGCTCCTCCCTATTTTTCTCTCTCTTCTGAAAGATGAATGTCCTGACGTCAGGCTGAACATCATCAGCAAGCTTGACCAAGTTAATCAGGTAATTGGTATTGACCTATTATCCCAGTCTCTATTACCAGCTATTGTTGAGCTTGCCGAAGATCGACACTGGAGGGTTCGACTTGCCATCATAGAATATATACCCTTATTGGCAAGTCAATTGAGTGTAGGGTTTTTTGATGATAAACTTGGACCCCTTTGTATGCAATGGCTTAAGGACAAGGTATACTCTATTCGAGATGCGGCTGCTAGTAATGTGAAACGCTTAGCAGAAGAGTTTGGACCAGAATGGGCAATGGAGCACATTATTCCTCAGGTTCTGGACATGATTAATGATCCACACTACCTGAATCGGATGATTGTTCTGCAAGCAATTTCTCTTCTGGGTCCTGTTTTGGGCTCTGAGATTACCTGTTCAAAACTGCTCCCTCTGGTCATCACTGCATCAAAAGATAGGGTTCCCAATATCAAGTTCAATGTTGCAAAAGTGTTGCAGTCTCTTGCTCCAGTTGTTGATCATTCTGTTGTCGAGCAGACTATTCGTCCCTGTTTGGTTGAGCTCAGCGAGGATCCAGATGTTGATGTTCGGTTCTTTGCCTCCCAAGCGCTTGAATCTAGCAATGAAATCATGGTAAACGATGGGAAATTCTCTGTCAATTCTGCTTACAGAAAAGCCTCTCTTCCTCATAATCAGAGTTCATCCTTGTTGAAAAGATTAAATAAGTCCTTTGGAAACTTCGCTTGA 3531 0.4274 MATNTKFAKMGSFRYSFVEKRERLLSVKGYSQIGINIPESDEDETRSKRRCCSYRAFNDGIIDGWKALKRIAARAWEMGHNDPRKVIFSAKVGFGLMLLSLLIFFKESFNEMSQYCVWSIMTVVVVFEFSIGATLSKGFNRALGTLSAAGLALGMAKLSEWAGNWEEAVIVIGTFIVGFCITYAKLYPPMKAYEYGFRVFLITYCLVTISGYHTREFIHTATNRFLFIAIGAAVALVVNICIYPIWAGEDLHNLVAKNFMGVARSLEASVNSYLSCVEYERVPSKILTYQASADDIIYSGYRSAVESIGQEETLMGFAVWEPPHGRYKMLKYPWKNYVKLSGALRHAAFTVLGMHGCILSELQAPPEKREVFKSEIQRVGYEGTKLLRELGNKVKNMEKLGEEDILYEIQEAAEQLQEKIDKKSYLLVDSESWEIGNRPRVTGETHDLMNMDEHRPPKFLYRSMSDTILDLKSGQAQKNLDNSISTELLPSYVAANDNRPANMKISWPAHVSFKADAVIVEDESKVYASASSLSLATFTTLMIEFVARLHNVVDAFEELGEVAKFKDPLEQQTPQTGFWTRLCDCLSFLRISRDNMAAVNEPLYPIAVLIDELKNDDIQIRLNSIRKLSTIARALGEERTRTELIPFLSENNDDDDVVLLAVAEELGVFIPYVGGIEHADVLLPPLETLCTVEETCVRDKAVESLCKIGAQMREKEMVEYFIPLVKGSVNVCYLPSHVNSFLPTTRLLVPFIFTSSSLKKRLVAGEWFTARVSSCGLLHIAYPYAPETMKTEMRTLYRKLCQDDMPMVRRSAATNLGKFAATVEADYLKTNIMSIFEDLAQDDQDSVRLLSVEGCVALGKLLEPQDCVAHILPAIVKFSQDLSADSSQYVRSSLASVVMGMAPLLGKEVTIEQLLPIFLSLLKDECPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLSVGFFDDKLGPLCMQWLKDKVYSIRDAAASNVKRLAEEFGPEWAMEHIIPQVLDMINDPHYLNRMIVLQAISLLGPVLGSEITCSKLLPLVITASKDRVPNIKFNVAKVLQSLAPVVDHSVVEQTIRPCLVELSEDPDVDVRFFASQALESSNEIMVNDGKFSVNSAYRKASLPHNQSSSLLKRLNKSFGNFA 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0448 1176 Gene3D - 883 1134 IPR011989 -
Lele45g0448 1176 ProSiteProfiles HEAT repeat profile. 1070 1108 IPR021133 -
Lele45g0448 1176 ProSiteProfiles HEAT repeat profile. 605 643 IPR021133 -
Lele45g0448 1176 ProSiteProfiles HEAT repeat profile. 953 991 IPR021133 -
Lele45g0448 1176 ProSiteProfiles HEAT repeat profile. 832 870 IPR021133 -
Lele45g0448 1176 ProSiteProfiles HEAT repeat profile. 1031 1069 IPR021133 -
Lele45g0448 1176 ProSiteProfiles HEAT repeat profile. 1109 1142 IPR021133 -
Lele45g0448 1176 ProSiteProfiles HEAT repeat profile. 871 913 IPR021133 -
Lele45g0448 1176 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 880 1141 - -
Lele45g0448 1176 ProSiteProfiles HEAT repeat profile. 914 952 IPR021133 -
Lele45g0448 1176 Gene3D - 597 882 IPR011989 -
Lele45g0448 1176 ProSiteProfiles HEAT repeat profile. 992 1030 IPR021133 -
Lele45g0448 1176 Pfam Aluminium activated malate transporter 76 560 IPR020966 GO:0015743
Lele45g0448 1176 SUPERFAMILY ARM repeat 603 1133 IPR016024 -
Lele45g0448 1176 Pfam HEAT repeats 916 1015 - -
Lele45g0448 1176 ProSiteProfiles HEAT repeat profile. 793 831 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0448 Lele-ChrLele45 3480184 3494291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0448 8 568 Miscellaneous Gene Families AT3G18440 56.627 0.0 656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0448 45 3480184 3494291 Lele46g0469 46 3199095 3201581 ECH
Lele45g0448 45 3480184 3494291 Lele45g0448 45 3480184 3494291 ECH
Lele45g0448 45 3480184 3494291 Lele47g0955 47 15589633 15608256 hybridization
Lele45g0448 45 3480184 3494291 Lele48g1017 48 15169043 15173078 hybridization