Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0469 ATGGCTACGAACACGAAACTCGCTAAGATGGGATCTTTCAGATACTCTTTCGCTGAGAAGAGGGAGAGGCTGCTCTCCATGAAAGGGTACTCTCAGATAGGGATCAATATTCCGGAATCTGACGAAGAAGAAGCTCGCTCAAGGAGGAGGCGTTGTTCTTACCGTGCTTTCGTCGACGGCATTATCGACGGCTGGAAGGCACTCAAGAGGATTGCTGCTAGGTCATGGGAGATGGGTCACAATGATCCCCGGAAGGTCATATTCTCTGCGAAAGTGGGATTTGGGTTGATGCTCCTCTCCTTGTTGATTTCTTTAAAGAGAGCAACACTTACCAAAGGGTTTAACAGAGGATTAGGGACTTTGTCTGCTGCAGGACTGGCTTTGGGAATGGCAAAGATATCAGAGTGGACTGGAGACTGGGAAGAAGCTGTTCTTGTTATTGGATCTTGTATCACCTACGCGAAACTATATCCCACGATGAAGTCTTATGAATATGGATTTCGTGTGTTCTTGATCACATATTGTTTAGTAGCAATGTCTGGTTATCATACCAGGGAATTCATTCATACAGCTACAAACAAATTTTTGTTCATTTTACTCGGTGCTACTGTTGCCTTGGTTGTTAATATTTGTATATATCCAATCTGGGCTGTTGAAGATCTGCATAATTTGGTAGCAAAAAACCTTATGGGTGTAGCAAGATCTTTGGAAGGTTCTCTAAATTATGTTCTTCATTGTCATTTTCAATCTATGGGATTTGCTGTGTGGGAGCCACCTCATGGTCGTTACAAAATGCTTAGATATCCTTGGAAGAACTATGTGAAAGTAAGTGGAGCACTAAGGCATGCTGCATTTACGGTCTTGGGTATGCATGGGTGTATACTTTCTGAATTACAGGCTCCACCTGAGAAGCGCCCAGTCTTTAAAAGTGAGATTCAAAGGGTAGGCTATGAAGGGGCCAAATTGTTTCGTGAACTAGGAAACAAAGTTTAG 993 0.431 MATNTKLAKMGSFRYSFAEKRERLLSMKGYSQIGINIPESDEEEARSRRRRCSYRAFVDGIIDGWKALKRIAARSWEMGHNDPRKVIFSAKVGFGLMLLSLLISLKRATLTKGFNRGLGTLSAAGLALGMAKISEWTGDWEEAVLVIGSCITYAKLYPTMKSYEYGFRVFLITYCLVAMSGYHTREFIHTATNKFLFILLGATVALVVNICIYPIWAVEDLHNLVAKNLMGVARSLEGSLNYVLHCHFQSMGFAVWEPPHGRYKMLRYPWKNYVKVSGALRHAAFTVLGMHGCILSELQAPPEKRPVFKSEIQRVGYEGAKLFRELGNKV 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0469 330 Pfam Aluminium activated malate transporter 251 329 IPR020966 GO:0015743
Lele46g0469 330 Pfam Aluminium activated malate transporter 76 105 IPR020966 GO:0015743
Lele46g0469 330 Pfam Aluminium activated malate transporter 108 247 IPR020966 GO:0015743
Lele46g0469 330 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 65 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0469 Lele-ChrLele46 3199095 3201581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0469 8 330 Miscellaneous Gene Families AT3G18440 49.618 1.77e-118 352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0448 45 3480184 3494291 Lele46g0469 46 3199095 3201581 ECH
Lele46g0469 46 3199095 3201581 Lele46g0469 46 3199095 3201581 ECH
Lele46g0469 46 3199095 3201581 Lele47g0955 47 15589633 15608256 hybridization
Lele46g0469 46 3199095 3201581 Lele48g1017 48 15169043 15173078 hybridization