Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0569 ATGGTCTATGCGTCTATATTATTCCACTTCTGCTTTGTTTTTGAAACCCAGAAAATGCAGCAAACAAAGGAGGCGAATGCCACCATGCAAGGCATTGAAAGCATGAGGATTATTACAGAGAAGAGGGTGAAGGATTTGATGGCAGACAACACGAGGAGGCTAGTAGAGGTGCCGTACACGGCGTCGCTGTCTCAGGTGATGACCACGCTGGTTGTGAACAACGTGGTGGCGGTGCCAGCAGCGGCACCGGCTGGGCAATGGATCGGGGCCGGCGGGTCAATGATCGTGGAAACAGATAAGCAAACGGGAACCCCACGGAAGCATTACATAGGGATCGTGACCATGCTTGATATTGCAGCTCACATAGCTGGAGACGATCACTTGAGCAAGAACGATGCTGGAATTCAAGATCTTCAGGAAAAAATGTCTGCGCCAGTGTCCTCCATTATAGGTCACTGCGTCGAAGGTCTCAACTTATGGACTCTCAGTCCTAATACCAGTTTAATGGATTGTATGGAAGTATTTAGCAAAGGGGTGCATCGAGCTATGATACCAGTGGAGAGCCAAATGCAGGAAATATCAGAAAGTGGAGGAATAGAACTGGTAGAATCTTCTTCAGGCTACCAAATGCTAACTCAAATGGACGTGATCAAGTTCTTGAAACACCACTCTGCTGAATTGAACCACGTTATGGGACGCTCTGTTGAAGATCTTTGCGCAGTTACAGATAATGTGTACGCCATCACTGAACGCACAAGACTTATTGATGCCATTAGGTGCTTGAAAGCTTCCATGCTCAACGCTGTTCCCATCATCAATGCCTCAGATGTTGGCCCAGACGATCACAAGCAGCTTATTAACGGAAGAAGCAGGAAGGTGATAGGGACATTTTCTGCGACTGACTTGAGGAGATGTGACATAGAGACACTGAGATTCTGGCTAGGAAAAAGTGCTCTAAGATTCACAGAACTGAATAATGCAACAGAAACTCAGGAGAGGAGTACTACGACAGGCTCATCGTCGTCAAGAAGAGAACTAGTGACATCCAATGCTGAAACTACGTTATCTGATGTAATTGAAAAGGCAGTAACCAGACATGTTCATAGGGTTTGGGTGGTGGACCAACAAGGTTTGCTCGTTGGAGTTGTGTCGCTCTCAGACATAATTAGGGTTATAAGGACTTGTCTGCTCAGCACAAAGTGGTAA 1206 0.4643 MVYASILFHFCFVFETQKMQQTKEANATMQGIESMRIITEKRVKDLMADNTRRLVEVPYTASLSQVMTTLVVNNVVAVPAAAPAGQWIGAGGSMIVETDKQTGTPRKHYIGIVTMLDIAAHIAGDDHLSKNDAGIQDLQEKMSAPVSSIIGHCVEGLNLWTLSPNTSLMDCMEVFSKGVHRAMIPVESQMQEISESGGIELVESSSGYQMLTQMDVIKFLKHHSAELNHVMGRSVEDLCAVTDNVYAITERTRLIDAIRCLKASMLNAVPIINASDVGPDDHKQLINGRSRKVIGTFSATDLRRCDIETLRFWLGKSALRFTELNNATETQERSTTTGSSSSRRELVTSNAETTLSDVIEKAVTRHVHRVWVVDQQGLLVGVVSLSDIIRVIRTCLLSTKW 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0569 401 Pfam CBS domain 344 392 IPR000644 -
Lele44g0569 401 ProSiteProfiles CBS domain profile. 341 399 IPR000644 -
Lele44g0569 401 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 38 393 - -
Lele44g0569 401 Gene3D - 23 228 IPR046342 -
Lele44g0569 401 SUPERFAMILY CBS-domain pair 209 392 IPR046342 -
Lele44g0569 401 SUPERFAMILY CBS-domain pair 36 184 IPR046342 -
Lele44g0569 401 MobiDBLite consensus disorder prediction 327 348 - -
Lele44g0569 401 Gene3D - 229 394 IPR046342 -
Lele44g0569 401 SMART cbs_1 244 307 IPR000644 -
Lele44g0569 401 SMART cbs_1 345 393 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0569 Lele-ChrLele44 4433699 4436199 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g0569 44 4433699 4436199 Lele37g0508 37 4130745 4135326 CCT
Lele44g0569 44 4433699 4436199 Lele38g0477 38 3834577 3839207 CCT
Lele44g0569 44 4433699 4436199 Lele39g0919 39 18142688 18153757 CCT
Lele44g0569 44 4433699 4436199 Lele40g0449 40 3704304 3708878 CCT
Lele41g0782 41 17648886 17651730 Lele44g0569 44 4433699 4436199 hybridization
Lele42g0771 42 20726209 20728594 Lele44g0569 44 4433699 4436199 hybridization