Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0782 ATGCCTCTATATTATTCCACTACAGTAACAACCATCGGTCCATTGAGAAGCACTATTACTGCTTTGTTTTTGAAACCTAGAAACACAAACTTCGTTTTTAAGGCTCAAGACATGCAGCAAACAAAGGAGATGAATGCCACCATGCAAGGCATTGAAAGCATGAGGATTATTACAGAGAAGAAGGTGAAGGATTTGATGGCAAACCAAACTAAGAGGCTAGTAGAGGTGCCGTACACGGCGTCGCTGTCTCAGGTGATGACCACGCTGGTTGCGAACAACGTGGTGGCTGTGCCGGCAGCGGCACCGCCTGGACAGTGGATCGGGGCAGGCGGGTCGATGATCGTGGAAACAGATAAGCAAACGGGAACCCCGCGGAAGCATTACATAGGGATCGTCACCATGCTTGATATTGCAGCTCACATAGCTGGAGATGACCACTTGAGGCAGAACGATGATGGAAGTCAAGATCTTCAGGAAAAATTGTCTGCGCCAGTGTCATCCATTATAGGTCACTGCGCCGAAGGTCTCAACTTATGGACTCTCAGTCCTAACACCAGTTTAATGGATTGTATGGAAGTATTTAGCAAAGGGGTGCATCGAGCTATGATACCAATGGAGAGCCATATGCAGGAGATATCAGAAAGTGGAGGAATTGAACTCATAGAATCTTCTTCAGGCTACCAAATGCTGACTCAAATGGACGTTATCAAGTTCTTGAACCAGCACGCTGCTGATGAATTGAAACACATTATGGGACGCTCTGTTGAAGATCTGTGTGCAGTCACAGATAAAGTGTACGCCATCACAGAACGCACAAGACTTATTGATGCCATTAGGTGCTTGAAAGCTTCCATGCTCAACGCTGTTCCCATCATTCATGCCTCAGATGTTGGCCCAGATGATCACAAGCAGCTTCTTAATGGAAGAAGCAGGAAGCTGATAGGGACATTTTCTGCGACAGACTTAAGGAGATGTGACATAGAGACACTAAGATTTTGGTTAGGCAAAAGTGCTCTAAAATTCACAGAACTGAATAATGCAACAGAAACTCAGGAGAGTATTAGTACAACGACTACAACAGGCTCGTCGTCAAGAAGAGAACTGGTGACATGCAATGCTGAAACTACGTTATATGATGTAATTGACAAGGCAGTGACCAGACATGTTCATAGGGTGTGGGTGGTGGACCAAAAAGGTTTCCTCGTTGGAGTTGTGTCGCTCTCCGACATTATTAGGGTTATAAGGACTTGTCTGCTCAGCACAAAGTGGTAA 1272 0.4552 MPLYYSTTVTTIGPLRSTITALFLKPRNTNFVFKAQDMQQTKEMNATMQGIESMRIITEKKVKDLMANQTKRLVEVPYTASLSQVMTTLVANNVVAVPAAAPPGQWIGAGGSMIVETDKQTGTPRKHYIGIVTMLDIAAHIAGDDHLRQNDDGSQDLQEKLSAPVSSIIGHCAEGLNLWTLSPNTSLMDCMEVFSKGVHRAMIPMESHMQEISESGGIELIESSSGYQMLTQMDVIKFLNQHAADELKHIMGRSVEDLCAVTDKVYAITERTRLIDAIRCLKASMLNAVPIIHASDVGPDDHKQLLNGRSRKLIGTFSATDLRRCDIETLRFWLGKSALKFTELNNATETQESISTTTTTGSSSRRELVTCNAETTLYDVIDKAVTRHVHRVWVVDQKGFLVGVVSLSDIIRVIRTCLLSTKW 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0782 423 Gene3D - 248 418 IPR046342 -
Lele41g0782 423 Pfam CBS domain 365 414 IPR000644 -
Lele41g0782 423 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 55 415 - -
Lele41g0782 423 Gene3D - 42 215 IPR046342 -
Lele41g0782 423 SUPERFAMILY CBS-domain pair 55 203 IPR046342 -
Lele41g0782 423 ProSiteProfiles CBS domain profile. 363 421 IPR000644 -
Lele41g0782 423 SUPERFAMILY CBS-domain pair 228 414 IPR046342 -
Lele41g0782 423 SMART cbs_1 367 415 IPR000644 -
Lele41g0782 423 SMART cbs_1 264 327 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0782 Lele-ChrLele41 17648886 17651730 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0782 41 17648886 17651730 Lele43g0617 43 5471806 5474546 hybridization
Lele41g0782 41 17648886 17651730 Lele44g0569 44 4433699 4436199 hybridization