Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0771 ATGACCACGCTGGTTGCGAACAACTTGGTGGCGGTGCCATCAGCGGCACCGCCTGGGCAATGGATTGGGGCCGGCGGGTCAATGATCGTGGAAACAGATAAGCAAACGGGAACCCCACGGAAGCATTACATAGGGATCGTGACCATGCTTGATATCGCAGCTCACATAGCTGGAGACGACCACTTGAGCCAGAACGATGCTGGAATTCAAGATCTTTGGGAAAAAATGTCTGCGCCAGTGTCCTCCATTATAGGTCACTGCATCGAAGGTCTCAACTTATGGACTCTCAGTCCTAATACCAGTTTAATGGATTGTATGGAAGTATTTAGCAAAGGGGTGCATCGAGCTATGATGCCAGTGGAGAGCCAAATGCAGGAAATATCAGAAAGTGGAGGAATTGAACTGATAGAATCTTCTTCAGGCTACCAAATGCTAACTCAAATGGACGTGATCAAGTTCTTGAAACACCACTCTGCTGAATTGAAACATGTTATGGGACGGTCTGTTGAAGATCTTTGCGCAGTTACAGATAATGTGTACGCCATCACTGAACGCACAAGACTTATTGACGCCATTAGGTGCTTGAAAGCTTCCATGCTCAACGCTGTTCCCATCATCAATGCCTCAGATGTTGGCCCAGATGATCACAAGCAGCTTCTTAACGGAAGAAGCAGGAAGGTGATAGGAACATTTTCTGCGACTGACTTGAGGAGATGTGACATAGAGACCCTGAGATTCTGGCTAGGAAAAAGTGCTCTAAGATTCACAGAACTGAATAGTGCAACAGAAACTCAGGAGAGTAGTACTACGACAGGCTCATCGTCGTCAAGAAGAGAACTAGTGACATCCAATGCTGAAACAACATTATCTGATGTAATTGACAAGGCAGTAACCAGACATGTTCATAGGGTTTGGGTGGTGGACCAACAAGGTTTGCTCGTTGGAGTTGTGTCGCTCTCAGACATAATTAGGGTTATAAGGACTTGTCTGCTCAGCACAAAGTAG 1005 0.4627 MTTLVANNLVAVPSAAPPGQWIGAGGSMIVETDKQTGTPRKHYIGIVTMLDIAAHIAGDDHLSQNDAGIQDLWEKMSAPVSSIIGHCIEGLNLWTLSPNTSLMDCMEVFSKGVHRAMMPVESQMQEISESGGIELIESSSGYQMLTQMDVIKFLKHHSAELKHVMGRSVEDLCAVTDNVYAITERTRLIDAIRCLKASMLNAVPIINASDVGPDDHKQLLNGRSRKVIGTFSATDLRRCDIETLRFWLGKSALRFTELNSATETQESSTTTGSSSSRRELVTSNAETTLSDVIDKAVTRHVHRVWVVDQQGLLVGVVSLSDIIRVIRTCLLSTK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0771 334 MobiDBLite consensus disorder prediction 261 282 - -
Lele42g0771 334 SUPERFAMILY CBS-domain pair 40 116 IPR046342 -
Lele42g0771 334 SUPERFAMILY CBS-domain pair 143 326 IPR046342 -
Lele42g0771 334 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 5 327 - -
Lele42g0771 334 ProSiteProfiles CBS domain profile. 275 333 IPR000644 -
Lele42g0771 334 SMART cbs_1 279 327 IPR000644 -
Lele42g0771 334 SMART cbs_1 178 241 IPR000644 -
Lele42g0771 334 Pfam CBS domain 278 326 IPR000644 -
Lele42g0771 334 Gene3D - 161 328 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0771 Lele-ChrLele42 20726209 20728594 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0771 42 20726209 20728594 Lele43g0617 43 5471806 5474546 hybridization
Lele42g0771 42 20726209 20728594 Lele44g0569 44 4433699 4436199 hybridization