Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0526 ATGTTGTATTTAGTAGTACAGATTCAATTCTGCGCCTGTGTGTTGAATACCTTTTCGTCTAAATTCCGGCTGCCAGTTGTTGCCGAGGTGTTACGAGAGAATTGGGAGCTCCTGGGGCTGAGAAAGGAGGAAGTTGAGATGGGTTCGTACGGAAATCTTGCAAGGAGGGCTTTGGAAACCGAGATGCCGATCATGGTGAAGATGCAGGAATTGCTTCGAGGAGCCAAGAATGCCATGTCCTTGGCCCAGGGGGTGGTTCATTGGCAACCTCCAAAGCAAGCATTGGACAAGGTGAAAGAACTTGTATGGGAGCCTTCAGTTAGTCGCTATGGTACTGATGAAGGTCTTCCTGAACTTAGAGAGGCATTAATAAAAAAGTTGCATCATGAAAATAATTTGCAGAAGTCTTCGGTGATGGTTACAGCTGGTGCTAATCAGGCATTCGTTAATTTAGTCCTTACATTATGTGATGCGGGGGATTCGGTGGTTATGTTTGTGCCCTACTATTTCAACGCTTACATGTCCTTCCAGATGACTGGCGTCACCAATATACTTGTGGGTCCCGGTGACCCCAAAACACTTCATCCAGATGCAGATTGGTTGGAAAAGATATTATCAGAAACTAAACCTACCCCAAAGCTTGTCACTGTTGTTAATCCGGGCAACCCAAGTGGAACTTATATTCCAGATCCTCTTCTCAAGAGGATTTCAGATCTCTGCTTGAAAGCTGGCTCTTGGCTTGTTGTTGATAATACTTATGAGTATTTTATGTATGATGGTCTGAAACACACTTGTGTGGAGGGAAATCACATTGTTAACGTCTTCTCTTTCTCAAAAGCATATGGAATGATGGGCTGGCGCGTGGGATATATAGCATATCCATCTGAAGTAGAAGGTTTTGCTGCTCAGCTTCTCAAGGTCCAAGACAACATTCCTATCTGTGCTCCGATAATCTCGCAGTACCTCGCCCTCCACTCGTTAGAAATGGGACCCGAGTGGGTCACAGAGAGAGTACAGAGTCTCGTGAAGAACCGGGAAATCGTTCTGGAGGCGCTGTCCCCTCTCGGAGAAGGTTCTGTGAAAGGAGGAGAAGGAGCTATATACTTATGGGCAAAGCTCCCAGATGGCCACGCCGATGATTTCGAAGTTGTTCACTGGCTCGCTCATAGGCACGGGATTGCTGTTATTCCTGGAAGCGCTTGCGGGAGTCCGGGGAATCTTCGGATTTCATTCGGAGGCTTGACAGAGAATGATTGCAAAGCTGCTGCAGAGAAGCTCAAGAGAGGTTTGGAAGAACTTGTGAGAGATGGTTTAGTGCAGTAG 1323 0.4656 MLYLVVQIQFCACVLNTFSSKFRLPVVAEVLRENWELLGLRKEEVEMGSYGNLARRALETEMPIMVKMQELLRGAKNAMSLAQGVVHWQPPKQALDKVKELVWEPSVSRYGTDEGLPELREALIKKLHHENNLQKSSVMVTAGANQAFVNLVLTLCDAGDSVVMFVPYYFNAYMSFQMTGVTNILVGPGDPKTLHPDADWLEKILSETKPTPKLVTVVNPGNPSGTYIPDPLLKRISDLCLKAGSWLVVDNTYEYFMYDGLKHTCVEGNHIVNVFSFSKAYGMMGWRVGYIAYPSEVEGFAAQLLKVQDNIPICAPIISQYLALHSLEMGPEWVTERVQSLVKNREIVLEALSPLGEGSVKGGEGAIYLWAKLPDGHADDFEVVHWLAHRHGIAVIPGSACGSPGNLRISFGGLTENDCKAAAEKLKRGLEELVRDGLVQ 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0526 440 CDD AAT_like 79 428 - -
Lele44g0526 440 Gene3D - 56 435 IPR015421 GO:0003824
Lele44g0526 440 PANTHER ASPARTATE AMINOTRANSFERASE 61 433 - -
Lele44g0526 440 SUPERFAMILY PLP-dependent transferases 70 433 IPR015424 -
Lele44g0526 440 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 276 289 IPR004838 GO:0003824|GO:0009058|GO:0030170
Lele44g0526 440 Pfam Aminotransferase class I and II 77 426 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0526 Lele-ChrLele44 4091278 4100168 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g0526 44 4091278 4100168 Lele37g0464 37 3838218 3842236 CCT
Lele44g0526 44 4091278 4100168 Lele38g0431 38 3508511 3513188 CCT
Lele44g0526 44 4091278 4100168 Lele39g0961 39 18450805 18454794 CCT
Lele44g0526 44 4091278 4100168 Lele40g0407 40 3344713 3348665 CCT
Lele41g0829 41 17992786 17997390 Lele44g0526 44 4091278 4100168 hybridization
Lele42g0817 42 21083429 21088278 Lele44g0526 44 4091278 4100168 hybridization