Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0431 ATGAGTTTATATATTCACGTTCCAAGGTTTTCAATCGCAAACGTTCCTTTCACAGCCTGTGCTGTGAATCTTGTGATCCGCCATATTGTTGGTTTTCTTCAAGGGACCGAAGAGGGAGACATGGACGCTGTTCTTCAGACGAGAGGGCTTCTCTCTCTCCCTACCAACCCCAGAAATAGGGTTCTAAACCCATCACAGGGCCTGAGGCAAAGATTTTTCTCCCCAAAACCCAAAATCCTTGGTGGGTCTTCTCTATCAACCAATGGGTTCCAGAAATTTCATGGCTTTGCCTCAAAACCTAATAGCCTTATCCAAAAGGATAGAAATTTGTTCATCTGTAAGGCTGAAGCCGCCGCCGCCGCTGATGGGCAGCCCCTATACAGTGAAATCGAAATTGACAAACCAAAATTCTTGGGTATTGAGGTTGCTACCCTTAAGAAGATTATACCGCTTGGGTTGATGTTCTTTTGTATCCTCTTCAACTATACAATCCTCAGGGATACAAAGGATGTTCTTGTTGTGACAGCTAGAGGAAGTAGTGCAGAGATTATTCCTTTCCTTAAAACTTGGGTGAATCTGCCTATGGCTGTTGGGTTTATGTTGTTATACACAAAATTGGCTGATGTTCTACCCAAGCAAGCTTTGTTCTACACTGTTATTGTCCCCTTCATCGCCTTCTTTGCGGCTTTTGGATTTGTTCTCTATCCTCTTAGCAACTATATCCACCCTCAAGCATTCGCAGATAAGCTTCTCAATATCCTTGGACCTAGGTTCCTTGGTCCACTCGCTATTATGAGAATCTGGAGCTTTTGTTTGTTCTATGTCATGGCTGAATTGTGGGGGAGTGTCGTGATTTCAGTGCTCTTCTGGGGGTTCGCCAATCAGATAACTACTGTTGAGGAAGCAAAACGTTTCTATCCTTTGTTTGGATTAGGAGCCAATGTTGCCCTTATATTCTCAGGTCGGACTGTGAAGTATTTCTCTAATCTGAGGCAGAACTTAGGTCCTGGAGTTGATGGTTGGGCCATATCTTTAAAAGGGATGATGAGCATTGTGGTGCTTCTGGGTGGTGCAATTTGTTTGCTGTACTGGTGGGTGAATAGACATGTTCCTCTTCCTACACGAAGCAAGAAGAAGAAGGAAAAGGTCAGAATGGGAACAATGGAGAGCTTGAAGTTCTTGGTGTCTTCGAAATACGTTAGAGATCTTGCAACCTTGGTGGTTGCTTATGGAATCAGCATTAACCTTGTTGAGGTTACATGGAAATCAAAGCTCAAAGCCCAGTTCCCTAGTCCGAATGAATACTCTTCTTTTATGGGCGACTTCTCAACCGCAACTGGAATCATGACATTCACGATGATGCTTCTTAGCCAATTTATCTTCAACAAATACGGATGGGGAGTTGCTGCGAAGATCACACCCACAGTCCTGCTTCTGACAGGAGTTGGATTCTTTTCTCTTCTACTGTTTGGAGCTCCACTCGCACCGGCTCTTGCACAATTCGGAATGACTCCTCTTCTTGCAGCCGTATATGTTGGTGCTATGCAGAACATTTTCAGCAAGAGTGCTAAGTACAGCTTATTCGATCCCTGCAAGGAAATGGCTTACATACCCTTGGATGAGGATACCAAGGTTAAGGGGAAGGCAGCCATTGATGTTGTTTGCAACCCATTGGGGAAATCTGGAGGTGCACTGATTCAGCAATTTATGATCTTGACCTTCGGGTCCCTTGCGAATTCGACTCCATATCTGGGAGGGGTGCTTCTTGTGATTGTTCTTGCCTGGTTAGCAGCAGCCAGGTCATTGGATGGTCAGTTCACTGCATTGCGCCGAGAGGAAGAGCTCGAGAAAGAGATGGAAAGGGCATCGGTTAAGATACCGGTGGTGGCTGAAAATGAATCCGGGAATGGTTCTCTCGGAAGCGGATCGCAGCCACTGAGCGACTCATCGAGTAGTCCATCTGAAACACCAACTTCTCGCAATATTTAG 1989 0.4525 MSLYIHVPRFSIANVPFTACAVNLVIRHIVGFLQGTEEGDMDAVLQTRGLLSLPTNPRNRVLNPSQGLRQRFFSPKPKILGGSSLSTNGFQKFHGFASKPNSLIQKDRNLFICKAEAAAAADGQPLYSEIEIDKPKFLGIEVATLKKIIPLGLMFFCILFNYTILRDTKDVLVVTARGSSAEIIPFLKTWVNLPMAVGFMLLYTKLADVLPKQALFYTVIVPFIAFFAAFGFVLYPLSNYIHPQAFADKLLNILGPRFLGPLAIMRIWSFCLFYVMAELWGSVVISVLFWGFANQITTVEEAKRFYPLFGLGANVALIFSGRTVKYFSNLRQNLGPGVDGWAISLKGMMSIVVLLGGAICLLYWWVNRHVPLPTRSKKKKEKVRMGTMESLKFLVSSKYVRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIMTFTMMLLSQFIFNKYGWGVAAKITPTVLLLTGVGFFSLLLFGAPLAPALAQFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGVLLVIVLAWLAAARSLDGQFTALRREEELEKEMERASVKIPVVAENESGNGSLGSGSQPLSDSSSSPSETPTSRNI 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0431 662 SUPERFAMILY MFS general substrate transporter 148 600 IPR036259 -
Lele38g0431 662 TIGRFAM AAA: ADP/ATP carrier protein family 140 606 IPR004667 GO:0005471|GO:0006862|GO:0016020
Lele38g0431 662 MobiDBLite consensus disorder prediction 634 662 - -
Lele38g0431 662 MobiDBLite consensus disorder prediction 626 662 - -
Lele38g0431 662 Pfam TLC ATP/ADP transporter 135 606 IPR004667 GO:0005471|GO:0006862|GO:0016020
Lele38g0431 662 PANTHER - 41 660 IPR004667 GO:0005471|GO:0006862|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0431 Lele-ChrLele38 3508511 3513188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0431 41 640 Organic Solute Cotransporters AT1G80300 80.587 0.0 954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g0566 43 5100883 5105726 Lele38g0431 38 3508511 3513188 CCT
Lele44g0526 44 4091278 4100168 Lele38g0431 38 3508511 3513188 CCT
Lele38g0431 38 3508511 3513188 Lele38g0431 38 3508511 3513188 ECH
Lele38g0431 38 3508511 3513188 Lele39g0961 39 18450805 18454794 hybridization
Lele38g0431 38 3508511 3513188 Lele40g0407 40 3344713 3348665 hybridization