Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0817 ATGGGTTCGTACGGAAATCTTGCAAGGAGGGCTTTGGAAACCGAGATGCCGATCATGGTGAAGATGCAGGAATTGCTTCGAGGAGCCAAGAATGCCATGTCCTTGGCCCAGGGGGTGGTTCATTGGCAACCTCCAAAGCAAGCATTGGACAAGGTGAAAGAACTTGTATGGGAGCCTTCAGTTAGTCGCTATGGTACTGATGAAGGTCTTCCTGAACTTAGAGAGGCATTAATAAAAAAGTTGCATCATGAAAATAATTTGCAGAAGTCTTCGGTGATGGTTACAGCTGGTGCTAATCAGGCATTCGTTAATTTAGTCCTTACATTATGTGATGCGGGGGATTCGGTGGTTATGTTTGTGCCTTACTATTTCAACGCTTACATGTCCTTCCAGATGACTGGCGTCACCAATATACTTGTGGGTCCCGGTGACCCCAAAACACTTCATCCAGATGCAGATTGGTTGGAAAAGATATTATCAGAAACTAAACCTACCCCAAAGCTTGTCACTGTTGTTAATCCGGGCAACCCAAGTGGAACTTATATTCCAGATCCTCTTCTCAAGAGGATTTCAGATCTCTGCTTGAAAGCTGGCTCTTGGCTTGTTGTTGATAATACATATGAGTATTTTATGTATGATGGTCTGAAACACACTTGTGTGGAGGGAAATCACATTGTTAACGTCTTCTCTTTCTCAAAAGCATATGGAATGATGGGGTGGCGCGTGGGATATATAGCATATCCATCTGAAGTAGAAGGTTTTGCTGCTCAGCTTCTCAAGGTCCAAGACAACATTCCTATCTGTGCTCCGATAATCTCGCAGTTCCTTGCCCTCCACTCGTTAGAAATGGGACCCGAGTGGGTCACAGAGAGAGTACAGAGTCTCGTGAAGAACCGGGAAATCGTTCTGGAGGCGCTGTCCCCTCTCGGAGAAGGTTCTGTGAAAGGAGGAGAAGGAGCTATATACTTATGGGCAAAGCTCCCAGATGGCCACGCCGATGATTTCAAAGTTGTTCACTGGCTCGCTCATAGGCACGGGATTGCTGTTATTCCTGGAAGCGCTTGCGGGAGTCCGGGGAATCTTCGGATTTCATTCGGAGGCTTGACAGAGAATGATTGCAAAGCTGCTGCAGAGAAGCTCAAGAGAGGTTTGGAAGAACTTGTGAGAGATGGTTTAGTGCAGTAG 1185 0.4633 MGSYGNLARRALETEMPIMVKMQELLRGAKNAMSLAQGVVHWQPPKQALDKVKELVWEPSVSRYGTDEGLPELREALIKKLHHENNLQKSSVMVTAGANQAFVNLVLTLCDAGDSVVMFVPYYFNAYMSFQMTGVTNILVGPGDPKTLHPDADWLEKILSETKPTPKLVTVVNPGNPSGTYIPDPLLKRISDLCLKAGSWLVVDNTYEYFMYDGLKHTCVEGNHIVNVFSFSKAYGMMGWRVGYIAYPSEVEGFAAQLLKVQDNIPICAPIISQFLALHSLEMGPEWVTERVQSLVKNREIVLEALSPLGEGSVKGGEGAIYLWAKLPDGHADDFKVVHWLAHRHGIAVIPGSACGSPGNLRISFGGLTENDCKAAAEKLKRGLEELVRDGLVQ 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0817 394 CDD AAT_like 33 382 - -
Lele42g0817 394 Gene3D - 10 389 IPR015421 GO:0003824
Lele42g0817 394 SUPERFAMILY PLP-dependent transferases 24 387 IPR015424 -
Lele42g0817 394 Pfam Aminotransferase class I and II 31 380 IPR004839 GO:0009058|GO:0030170
Lele42g0817 394 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 230 243 IPR004838 GO:0003824|GO:0009058|GO:0030170
Lele42g0817 394 PANTHER ASPARTATE AMINOTRANSFERASE 15 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0817 Lele-ChrLele42 21083429 21088278 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0817 42 21083429 21088278 Lele43g0566 43 5100883 5105726 hybridization
Lele42g0817 42 21083429 21088278 Lele44g0526 44 4091278 4100168 hybridization