Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0961 ATGGAGGCTGTTCTTCAGACGAAAGGGCTCCTCTCTCTTCCCACCAACCCCAGAAATAGGGTTCTAAACCCATCACAGGGCTTGAGGCAAAGATTTTTCTCTCCAAAACCCAAAATCCTTGGTGGGTCTTCTTTATCAACCAATGGGTTCCAGAAATTTCATGGCTTTGCCTCAAAACCTAATAGCCTTATCCAAAAGGATAGAAATCTGTTCATCTGTAAGGCTGAAGCAGCTGCTGCGGATGGTCAGCCCTTATACGGTGAAATCGAAATTGAGAAACCAAAATTCTTGGGTATTGAGGTTGCTACCGTTAAGAAGATTATACCGCTTGGGTTGATGTTCTTTTGTATCCTCTTCAATTATACAATCCTCAGAGATACAAAGGATGTTTTGGTTGTGACAGCTAGAGGAAGTAGTGCAGAGATTATTCCTTTCCTTAAAACTTGGGTAAATCTGCCTATGGCTGTTGGCTTTATGTTGTTATACACAAAATTGGCTGATGTTCTACCCAAGCAAGCTTTGTTCTACACTGTTATTGTACCCTTCATCGCCTTCTTTGGGGCGTTTGGATTTGTTCTCTATCCTCTTAGCAACTATATCCACCCTCAAGCATTTGCAGATAAGCTTCTCAACATCCTTGGACCTAGGTTCCTTGGTCCACTCGCTATTATGAGAATCTGGAGCTTTTGTTTGTTCTATGTCATGGCTGAATTGTGGGGGAGTGTGGTTATTTCAGTGCTCTTCTGGGGGTTCGCCAATCAGATAACTACTGTTGAGGAAGCCAAACGTTTCTATCCTTTGTTTGGATTAGGAGCCAATGTTGCCCTTATATTCTCGGGTCGGACGGTGAAGTACTTCTCTAATCTGAGGCAGAACTTAGGTCCTGGAGTCGATGGTTGGGCCATATCTTTAAAAGGGATGATGAGCATTGTGGTGCTTCTAGGCGGCGCTATTTGTTTGCTGTACTGGTGGGTGAATAGATATGTTCCTCTTCCTACACGAAGCAAGAAGAAGAAGGAAAAGGTCAAAATGGGAACCATGGAGAGCTTGAAGTTCTTGGTGTCTTCAAAATACATTAGAGATCTTGCAACCTTGGTGGTTGCTTACGGAATTAGCATTAACCTTGTTGAGGTTACATGGAAATCAAAGCTCAAAGCCCAGTTCCCTAGTCCAAATGAATACTCTTCTTTTATGGGCGACTTCTCAACCGCAACCGGAATCATGACATTCACAATGATGCTTCTTAGCCAATTTATCTTCAACAGATACGGATGGGGAGTTGCCGCGAAGATCACACCCACAGTCCTGCTCCTGACAGGAGTTGGATTCTTTTCTCTTATACTGTTCGGAGCTCCACTCGCACCAGCTCTTGCACAATTTGGAATGACTCCTCTTCTCGCAGCTGTATATGTTGGCGCTATGCAGAACATTTTCAGCAAGAGTGCTAAGTACAGCTTATTCGATCCCTGCAAGGAAATGGCTTACATACCCTTGGATGAGGATACCAAGGTTAAAGGGAAGGCAGCCATTGATGTTGTTTGCAACCCATTGGGGAAATCTGGAGGTGCACTGATTCAGCAATTTATGATCTTGACGTTCGGGTCCCTTGCTAATTCGACTCCATATCTGGGAGGGGTGCTTCTTGTGATTGTTCTTGCCTGGTTAGCAGCAGCCAGGTCTTTGGATGGCCAGTTCACTGCATTGCGCCAAGAGGAAGAGCTTGAGAAAGAGATGGAAAGGGCTTCAGTTAAGATACCGGTGGTGTCTGAAAATGAATCCGGGAATGGTTCTCTTGGAAGTGGATCGCAGCCACTGAGCGACTCATCGAGTAGTCCATCTGAAACACCGACATCTCGCAATATTTAG 1866 0.4469 MEAVLQTKGLLSLPTNPRNRVLNPSQGLRQRFFSPKPKILGGSSLSTNGFQKFHGFASKPNSLIQKDRNLFICKAEAAAADGQPLYGEIEIEKPKFLGIEVATVKKIIPLGLMFFCILFNYTILRDTKDVLVVTARGSSAEIIPFLKTWVNLPMAVGFMLLYTKLADVLPKQALFYTVIVPFIAFFGAFGFVLYPLSNYIHPQAFADKLLNILGPRFLGPLAIMRIWSFCLFYVMAELWGSVVISVLFWGFANQITTVEEAKRFYPLFGLGANVALIFSGRTVKYFSNLRQNLGPGVDGWAISLKGMMSIVVLLGGAICLLYWWVNRYVPLPTRSKKKKEKVKMGTMESLKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIMTFTMMLLSQFIFNRYGWGVAAKITPTVLLLTGVGFFSLILFGAPLAPALAQFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGVLLVIVLAWLAAARSLDGQFTALRQEEELEKEMERASVKIPVVSENESGNGSLGSGSQPLSDSSSSPSETPTSRNI 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0961 621 MobiDBLite consensus disorder prediction 579 621 - -
Lele39g0961 621 TIGRFAM AAA: ADP/ATP carrier protein family 99 565 IPR004667 GO:0005471|GO:0006862|GO:0016020
Lele39g0961 621 Pfam TLC ATP/ADP transporter 94 565 IPR004667 GO:0005471|GO:0006862|GO:0016020
Lele39g0961 621 SUPERFAMILY MFS general substrate transporter 107 559 IPR036259 -
Lele39g0961 621 MobiDBLite consensus disorder prediction 588 621 - -
Lele39g0961 621 PANTHER - 1 619 IPR004667 GO:0005471|GO:0006862|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0961 Lele-ChrLele39 18450805 18454794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0961 1 599 Organic Solute Cotransporters AT1G80300 81.639 0.0 965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g0566 43 5100883 5105726 Lele39g0961 39 18450805 18454794 CCT
Lele44g0526 44 4091278 4100168 Lele39g0961 39 18450805 18454794 CCT
Lele39g0961 39 18450805 18454794 Lele39g0961 39 18450805 18454794 ECH
Lele37g0464 37 3838218 3842236 Lele39g0961 39 18450805 18454794 hybridization
Lele38g0431 38 3508511 3513188 Lele39g0961 39 18450805 18454794 hybridization