Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1174 ATGCCTTGCCTTTATGTCTCCACCAACGTTAACTTAGACGGAATCGACACCGATCCCATCTTCTCTGAAGCTACCTCCGCCGTCTCCTCCATTATCGGAAAGCCCCCAAAGTATGTGATGGTGATATTGAAGGGGTCGGTGGCGATATCGTTTGAAGGGAACAAGGAACCGGCGGCATACGCAGAGATAGTGTCGATGGGAGGCATAGACTCACAGGTGAAGAAGAAGCTCATTGCCTCCATTGGCTCCATTCTCCACTCCAGGCTCTCTGTTCCACCTTCCAGATTCTTCCTCAAGGTCTTCGACACCACTGCTTTTCGTCCTAAACCCTCCTCCAAATTATGA 345 0.5043 MPCLYVSTNVNLDGIDTDPIFSEATSAVSSIIGKPPKYVMVILKGSVAISFEGNKEPAAYAEIVSMGGIDSQVKKKLIASIGSILHSRLSVPPSRFFLKVFDTTAFRPKPSSKL 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1174 114 FunFam Tautomerase/MIF superfamily protein 1 109 - -
Lele43g1174 114 Pfam Macrophage migration inhibitory factor (MIF) 2 105 IPR001398 -
Lele43g1174 114 SUPERFAMILY Tautomerase/MIF 1 103 IPR014347 -
Lele43g1174 114 PANTHER D-DOPACHROME DECARBOXYLASE 1 105 IPR001398 -
Lele43g1174 114 Gene3D Macrophage Migration Inhibitory Factor 2 107 IPR014347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1174 Lele-ChrLele43 20076876 20079843 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g1174 43 20076876 20079843 Lele37g1370 37 22554865 22556469 CCT
Lele43g1174 43 20076876 20079843 Lele38g1246 38 23316888 23319855 CCT
Lele43g1174 43 20076876 20079843 Lele39g0052 39 373030 374718 CCT
Lele43g1174 43 20076876 20079843 Lele40g1189 40 21818053 21820983 CCT
Lele43g1174 43 20076876 20079843 Lele43g1174 43 20076876 20079843 ECH
Lele41g0186 41 1524832 1527136 Lele43g1174 43 20076876 20079843 hybridization