Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1189 ATGACCAGATTATACCGACTCGTCTCAGAAATGGGTTTTGGATGTCTCAAAATTTCTTCGTTTGCTCCTTCGGCGATTGCTGGGGATGGTCTCACAAGAAACTCCACTTCTCTGCGTTCTTCTTCCTCACTCTGTCTTGCGAATATCCGAGGAAGCAGAAGAAATTTCATGGTCCATGCATCACCTGAGCTGAATTCTGCAGCCACAGCCGTTATTTTCGAACCGTTTGAGGAGATCAAGAAGGACGTCCTTACTGTTCCCATTGCTCCTCAAGTTTCTTTGGCTCGTCAGAACTACCAATATGAGTGTGAAGCTGCCATTAACGAGCAGATCAACGTGGAATACAACGTTTCCTATGTGTACCACTCCATGTTTGCCTACTTTGACAGAGACAACATTGCTCTGAAGGGCTTTGCCAAGTTTTTCAAGGAATCAAGTGAAGAAGAAAGAGAGCATGCTGAGAAACTTATGAAATATCAGAACGATCGTGGTGGACGAGTGTTACTTCACCCCATCAAGAATCCCCCCTCGGATTTTGAGCATTATGAAAAGGGCGATGCATTGTATGCTATGGAATTAGCTTTGTCTTTGGAGAAGTTAACAAACGAGAAACTACTGAATGTGTACAGCGTTGCGGACCACAACAATGATCCTGAGTTGGCTCACTTCATTCAGAGTGAGTTTCTCTCTGAGCAGGTAGAAGCAATCGAGGAGATAGCAAAGTATGTGGCTCAATTGAGAATGGTTGGAAAGGGTCACGGCGTGTGGCACTTTGATCAATGTCTTCGTCATCATGCGTGA 801 0.4482 MTRLYRLVSEMGFGCLKISSFAPSAIAGDGLTRNSTSLRSSSSLCLANIRGSRRNFMVHASPELNSAATAVIFEPFEEIKKDVLTVPIAPQVSLARQNYQYECEAAINEQINVEYNVSYVYHSMFAYFDRDNIALKGFAKFFKESSEEEREHAEKLMKYQNDRGGRVLLHPIKNPPSDFEHYEKGDALYAMELALSLEKLTNEKLLNVYSVADHNNDPELAHFIQSEFLSEQVEAIEEIAKYVAQLRMVGKGHGVWHFDQCLRHHA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1189 266 CDD Euk_Ferritin 102 260 - -
Lele40g1189 266 PANTHER FERRITIN 79 264 IPR001519 GO:0006826|GO:0006879|GO:0008199
Lele40g1189 266 Gene3D - 66 265 IPR012347 -
Lele40g1189 266 FunFam Ferritin 66 266 - -
Lele40g1189 266 ProSiteProfiles Ferritin-like diiron domain profile. 97 250 IPR009040 -
Lele40g1189 266 Pfam Ferritin-like domain 105 249 IPR008331 GO:0008199
Lele40g1189 266 ProSitePatterns Ferritin iron-binding regions signature 1. 148 166 IPR014034 -
Lele40g1189 266 SUPERFAMILY Ferritin-like 88 263 IPR009078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1189 Lele-ChrLele40 21818053 21820983 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g1174 43 20076876 20079843 Lele40g1189 40 21818053 21820983 CCT
Lele37g1370 37 22554865 22556469 Lele40g1189 40 21818053 21820983 hybridization
Lele38g1246 38 23316888 23319855 Lele40g1189 40 21818053 21820983 hybridization